Frontiers in MicrobiologySystems BiologyPeer-reviewed journal article
Quantitative examination of five stochastic cell-cycle and cell-size control models for Escherichia coli and Bacillus subtilis
Guillaume Le TreutiD, Fangwei SiiD, Dongyang LiiD, Suckjoon JuniD
Abstract
We examine five quantitative models of the cell-cycle and cell-size control in Escherichia coli and Bacillus subtilis that have been proposed over the last decade to explain single-cell experimental data generated with high-throughput methods. After presenting the statistical properties of these models, we test their predictions against experimental data. Based on simple calculations of the defining correlations in each model, we first dismiss the stochastic Helmstetter-Cooper model and the Initiation Adder model, and show that both the Replication Double Adder and the Independent Double Adder model are more consistent with the data than the other models. We then apply a recently proposed statistical analysis method and obtain that the Independent Double Adder model is the most likely model of the cell cycle. By showing that the Replication Double Adder model is fundamentally inconsistent with size convergence by the adder principle, we conclude that the Independent Double Adder model is most consistent with the data and the biology of bacterial cell-cycle and cell-size control. Mechanistically, the Independent Adder Model is equivalent to two biological principles: (i) balanced biosynthesis of the cell-cycle proteins, and (ii) their accumulation to a respective threshold number to trigger initiation and division.
- Citations
- 34
- FWCI
- 1.96
- Field percentile
- top 12%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Single-cell data and correlation analysis support the independent double adder model in both Escherichia coli and Bacillus subtilis
Guillaume Le Treut, Fangwei Si, … Suckjoon Jun·bioRxiv·Oct 6, 2020
- Response to comment on 'Initiation of chromosome replication controls both division and replication cycles in E. coli through a double-adder mechanism'
Guillaume Witz, Thomas Julou, Erik van Nimwegen·bioRxiv·Aug 4, 2020
- Initiation of chromosome replication controls both division and replication cycles in E. coli through a double-adder mechanism
Guillaume Witz, Erik van Nimwegen, Thomas Julou·eLifePeer-reviewed·Nov 11, 2019
- Comment on 'Initiation of chromosome replication controls both division and replication cycles in E. coli through a double-adder mechanism'
Guillaume Le Treut, Fangwei Si, … Suckjoon Jun·bioRxiv·May 8, 2020
- Cell size regulation in bacteria
Ariel Amir·Physical Review LettersPeer-reviewed·May 23, 2014
- Deciphering the Replication-Division Coordination in E. coli: A Unified Mathematical framework for Systematic Model Comparison
Alexandre Perrin, Marie Doumic, … Sylvie Méléard·bioRxiv·Jul 25, 2025