bioRxivGenomicsPreprint
Uniquely high spontaneous mutational load in blood cells of XP-C patients
Gordon Fan-HuangiD, Elizabeth L. SchmidtiD, Moonsook LeeiD, Shixiang SuniD, Christina L. BoulliD, Sheilagh MaguinessiD, Jan VijgiD, Laura J. NiedernhoferiD, Alexander Y. MasloviD
Abstract
We discovered a uniquely high spontaneous somatic mutational load in peripheral blood mononuclear cells (PBMCs) of Xeroderma Pigmentosum group C (XP-C) patients, characterized by elevated single nucleotide variants associated with mutation signatures SBS8 and SBS32, as well as an enrichment of single-nucleotide cytosine deletions. This hypermutability was markedly lower in fibroblasts, suggesting a replication-dependent mechanism of mutagenesis due to deficient global genome nucleotide excision repair (GG-NER). Our findings reveal distinct molecular subtypes within XP defined by spontaneous mutational load in normal blood cells and demonstrate that the exceptionally high mutation burden in XP-C leukemia originates from mutations already present prior to malignant transformation.
- organism: human
- assay: whole-genome sequencing
- research focus: differential expression
- research focus: variant calling
- research focus: gene regulatory network inference
- approach: statistical model
- Citations
- 0
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