bioRxivBioinformaticsPreprint
Machine learning predicts early-onset acute organ failure in critically ill patients with sickle cell disease
Akram MohammediD, Pradeep S. B. PodilaiD, Robert Lowell DavisiD, Kenneth I. AtagaiD, Jane Silva HankinsiD, Rishikesan KamaleswaraniD
Abstract
BackgroundSickle cell disease (SCD) is a genetic disorder of the red blood cells, resulting in multiple acute and chronic complications including pain episodes, stroke, and kidney disease. Patients with SCD develop chronic organ dysfunction, which may progress to organ failure during disease exacerbations. Early detection of acute physiological deterioration leading to organ failure is not always attainable. Machine learning techniques that allow for prediction of organ failure may enable earlier identification and treatment, and potentially reduce mortality. We tested the hypothesis that machine learning physiomarkers could predict the development of organ dysfunction in an adult sample of patients with SCD admitted to intensive care units.\n\nMethods and FindingsWe studied 63 sequential SCD patients with 163 patient encounters, mean age 33.0{+/-}11.0 years, admitted to intensive care units, some of whom (6.7%) had pre-existing cardiovascular or kidney disease. A subset of these patient encounters (37; 23%) met sequential organ failure assessment (SOFA) criteria. The site of organ failure included: central nervous system (32), cardiovascular (11), renal (10), liver (7), respiratory (5) and coagulation (2) systems. Most (81.5%) of the patient encounters who experienced organ failure had single organ failure. The other 126 SCD patient encounters served as controls. A set of signal processing features (such as fast fourier transform, energy, continuous wavelet transform, etc.) derived from heart rate, blood pressure, and respiratory rate were identified to distinguish patients with SCD who developed acute physiological deterioration leading to organ failure, from SCD patients who did not meet the criteria. A random forest model accurately predicted organ failure up to six hours prior to onset, with a five-fold cross-validation accuracy of 94.57% (average sensitivity and specificity of 90.24% and 98.9% respectively).\n\nConclusionsThis study demonstrates the viability of using machine learning to predict acute physiological deterioration heralded organ failure among hospitalized adults with SCD. The discovery of salient physiomarkers through machine learning techniques has the potential to further accelerate the development and implementation of innovative care delivery protocols and strategies for medically vulnerable patients.
- organism: human
- assay: electronic health records
- research focus: differential expression
- research focus: benchmarking
- approach: machine learning (classical)
- Citations
- 3
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Prediction of Acute Kidney Injury with a Machine Learning Algorithm using Electronic Health Record Data
Hamid Mohamadlou, Anna Lynn-Palevsky, … Ritankar Das·Canadian Journal of Kidney Health and DiseasePeer-reviewed·Jan 1, 2018
- Sickle Cell Disease Demographics and Clinical Epidemiology in Gambian Urban and Rural Cohorts Retrospective Analysis
Mustapha Dibbasey, Kevin Kum Esoh, … Alfred Amambua‐Ngwa·medRxiv·Jul 7, 2026
- Smartphone-based Sickle Cell Disease Detection and Monitoring for Point-of-Care Settings
- An integrative model of leukocyte genomics and organ dysfunction in heart failure patients requiring mechanical circulatory support
Nicholas Wisniewski, Galyna Bondar, … Mario Deng·bioRxiv·Aug 14, 2015
- Pediatric Severe Sepsis Prediction Using Machine Learning
Thomas Desautels, Jana L. Hoffman, … Ritankar Das·bioRxiv·Nov 22, 2017
- Machine Learning of the Cardiac Phenome and Skin Transcriptome to Categorize Heart Disease in Systemic Sclerosis
Monique Hinchcliff, Tracy Frech, … Sanjiv Jayendra Shah·bioRxiv·Nov 3, 2017