bioRxivBioinformaticsPreprint
Spatiotemporal Transcriptomes of Pig Hearts Reveal Midkine-Mediated Vascularization in a Chronic Myocardial Infarcted Model
Swarnaseetha AdusumalliiD, Samantha Lim, Vincent Ren, Li Yen ChongiD, Roy Tham, Lei YeiD, Yibin WangiD, Enrico G. PetrettoiD, Karl TryggvasoniD, Lynn YapiD
Abstract
Ischemic heart disease is the most prevalent cause of death globally. Regenerative cardiology using stem cell-based therapy is a potential approach to replace infarcted myocardial (MI) heart tissue. We used cardiovascular progenitors (CVPs) derived from human pluripotent embryonic stem cells differentiated to cardiomyocyte progenitors on a laminin 521+221 matrix and transplanted them into acute and chronic MI pig hearts (AMI and CMI). We performed time-series spatial transcriptomics to characterize these human cells at AMI 1- and 2- and at CMI 1-, 4- and 12 weeks post-transplantation. Both models showed high transcriptional reproducibility in the replicates. Furthermore, the human grafts engrafted well, matured, and expressed metabolic, ribosomal, T-tubule, and channel-related genes in the human graft over time. Cell-cell communication analysis revealed Midkine (MDK) signaling as a key pathway that may lead to increased angiogenesis of collaterals in the human graft.
- organism: plant (other)
- assay: spatial transcriptomics
- research focus: cell-cell communication
- approach: statistical model
- Citations
- 1
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