On Casein Kinase-2 (CK2) deregulation in NSCLC: an enzyme subunit-centered approach
G. V. Perez, L. Chen, D. Chenyi, Y. Ying, Z. Qiang, Z. Zhiwei, Y. Ke, S. E. Perea, Y. Perera
Abstract
CK2 is considered a constitutively active protein kinase promoting/supporting several neoplastic properties and inducing a so-called non-oncogene addiction in tumor cells. Compared to the extensive body of pre-clinical research, the translational and clinical information on CK2 is still limited. The holoenzyme, composed by a tetrameric array of two catalytic (CSNK2A1 and/or CSNK2A1) and two regulatory (CSNK2B) subunits, remains to be clinically validated. Herein, we interrogated available cancer multiomics databases to unravel CK2 deregulated expression in NSCLC. We focused our analysis on individual CK2 subunits assuming subunit-specific tumor supportive roles across cancers and particularly, within two major NSCLC subtypes. Moreover, we performed meta-analysis to uncover associations between CK2 expression and patient survival, as well as further correlations analysis with components of the tumor-microenvironment. The genomic and transcriptomic data analysis was complemented by IHC evaluation of CSNK2A1, CSNK2A2 and CSNK2B subunit expression, and CK2 enzymatic activity thereof. Overall, our data suggests that epigenetic, transcriptional and post-transcriptional regulatory mechanisms rather than mutational/gene amplification events may account for differential CK2 subunits expression/activity in NSCLC. Of note, CSNK2A1 and CSNK2B mRNA up-regulation consistently determine a worse patient prognosis in LUAD and correlated with increased infiltration of MDSCs/CAFs. Importantly, we corroborated that CK2 protein subunits levels and enzymatic activity are significantly exacerbated in LUAD and LUSC, but only CSNK2A1 positively correlated with tumor size and disease stage in the analyzed patient cohort, thus supporting our transcriptomic-based correlation analysis. Finally, we concluded that CSNK2A1 alone and/or the homo-tetramer thereof may be more instrumental to support NSCLC than CSNK2A2; thus, tailored drugs against these molecular CK2 entities may achieve better therapeutic windows at least for advanced lung cancer treatment.
02 /Specification & Classification
Click any tag to browse matching papers- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Unravelling the Oncogenic Potential and Prognostic Significance of CKS1B in Human Lung Adenocarcinoma and Squamous Cell Carcinoma: A Comprehensive Computational Analysis
A. T. Moin, M. A. Ullah, … M. J. Hosen·bioRxiv·Apr 28, 2023
- Resolving an underrepresented circulating tumor cell population in lung cancer enabled by Hexokinase 2 analysis
- RNA splicing variants of the novel long non-coding RNA, CyKILR, possess divergent biological functions in non-small cell lung cancer
Xiujie Xie, H. Patrick MacKnight, … Charles Edward Chalfant·Molecular Therapy — Nucleic AcidsPeer-reviewed·Dec 5, 2024
- CK2α phosphorylates CHIP for oncogenesis: A novel post-translational switch in cancer
Subhajit Karmakar, Mouli Chatterjee, … Mrinal K. Ghosh·bioRxiv·Oct 15, 2025
- Regulation of VEGFR2 and AKT signaling by Musashi-2 in lung cancer
I. Bychkov, I. Topchu, … Y. Boumber·bioRxiv·Mar 29, 2023
- Comparative analysis of transcriptomic and proteomic expression between two non-small cell lung cancer subtypes
Ben Nicholas, Alistair Bailey, … Paul J. S. Skipp·Journal of Proteome ResearchPeer-reviewed·Jan 8, 2025