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GeneticsBMC Genomics
Peer-reviewed journal article

A Comprehensive Allele Specific Expression Resource for the Equine Transcriptome

Harrison D. Heath, Sichong PengiD, Tomasz SzmatołaiD, Stephanie Ryan, Rebecca R. BelloneiD, Ted KalbfleischiD, Jessica L. PeterseniD, Carrie J. FinnoiD

Abstract

BackgroundAllele-specific expression (ASE) analysis provides a nuanced view of cis-regulatory mechanisms affecting gene expression. ResultsIn this work, we introduce and highlight the significance of an equine ASE analysis, containing integrated long- and short-read RNA sequencing data, along with insight from histone modification data, from four healthy Thoroughbreds (2 mares and 2 stallions) across 9 tissues. ConclusionsThis valuable publicly accessible resource is poised to facilitate investigations into regulatory variation in equine tissues and foster a deeper understanding of the impact of allelic imbalance in equine health and disease at the molecular level.

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