bioRxivCell BiologyPreprint
Determination of factors that allow cryogenic nanoscopy with high power illumination without devitrification
Abstract
Cryogenic super-resolution fluorescence light microscopy, or nanoscopy, has been demonstrated to be useful to close the resolution gap in cryogenic correlative light and electron microscopy (CLEM). Importantly, under cryogenic conditions fundamental resolution barriers that are imposed by molecular motion and photobleaching on fluorescence microscopy are circumvented. The resolution gain is even higher in nanoscopic methods, due to higher obtainable resolution and slower acquisition speed, rendering cryo-nanoscopy promising even beyond CLEM. However, cryogenic nanoscopy is often limited by heating and devitrification of the sample through strong laser irradiation, with drastic differences in reported tolerable power densities. We therefore investigated the laser-induced heating in different setups for cryogenic nanoscopy by time-dependent finite-element simulations complemented with absorption measurements of mammalian cells. Laser-induced heating happened in milliseconds, precluding efficient sample preservation by most intermittent illuminations. Under moderate light densities used for single molecule localization microscopy, absorbance by mammalian cells was too weak to explain devitrification and heating is governed by absorption of supporting material. However, the much higher power densities used in stimulated emission depletion nanoscopy resulted in temperatures clearly above the devitrification temperature from absorption by cells alone, unless the sample was mounted on an efficient heat exchanger, such as a diamond.
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Effects of base temperature, immersion medium, and EM grid material on devitrification thresholds in cryogenic optical super-resolution microscopy
Soheil Mojiri, Joseph M. Dobbs, … Jonas Ries·Journal of Structural BiologyPeer-reviewed·Jul 17, 2025
- Solid immersion microscopy readily and inexpensively enables 12 nm resolution on plunge-frozen cells
Lin Wang, Benji Bateman, … Marisa L. Martin-Fernandez·bioRxiv·Jul 20, 2018
- Cryo-FIB lamellae enable ultra-high excitation laser intensities for cryogenic super-resolution fluorescence imaging
Soheil Mojiri, Joseph M. Dobbs, … Julia Mahamid·bioRxiv·Apr 22, 2026
- On-lamella super-resolution cryo-CLEM for cryo-ET enabled by vacuum-free ultra-stable cryogenic fluorescence microscopy
Julian Falckenhayn, Vi Quint Duong, … Rainer Kaufmann·bioRxiv·Apr 15, 2026
- Super-resolution fluorescence imaging of cryosamples does not limit achievable resolution in cryoEM
Mart G.F. Last, Willem E. M. Noteborn, … Thomas Harry Sharp·Journal of Structural BiologyPeer-reviewed·Oct 31, 2023
- Fluorescence polarization control for on-off switching of single molecules at cryogenic temperatures
C. Hulleman, M. Huisman, … B. Rieger·bioRxiv·Oct 17, 2017