Harnessing sleep/wake state tracking by olfactory bulb oscillations to perform fully brain-based sleep scoring in mice
Sophie BaguriD, Marie Masako LacroixiD, Gaëtan de Lavilléon, Julie M. LefortiD, H GeoffroyiD, Karim BenchenaneiD
Abstract
It has long been thought that sleep scoring could not be achieved with brain signals alone despite the deep neuromodulatory transformations that accompany sleep state changes. Here we demonstrate using multi-site electrophysiological LFP recordings in freely moving mice that gamma power in the olfactory bulb (OB) allows for clear classification of sleep and wake. Coupled with hippocampal theta activity, it allows the construction of a sleep scoring algorithm that relies on brain activity alone. This method reaches over 90% homology with classical methods based on muscular activity (EMG) and video tracking. Moreover, contrary to EMG, OB gamma power allows correct discrimination between sleep and immobility in ambiguous situations such as fear-related freezing. We use the instantaneous power of hippocampal theta oscillation and OB gamma oscillation to construct a 2D phase-space that is highly robust across mice and days. Dynamic analysis of trajectories within this space yields a novel characterization of sleep/wake and wake/sleep transitions as deeply divergent phenomena. Whereas waking up is a fast and direct transition, falling asleep is best described as stochastic and gradual change. Altogether this methodology opens the avenue for multi-timescale characterization of sleep states with high temporal resolution based on brain signals only.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 49
- FWCI
- 2.38
- Field percentile
- top 12%
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- BOLD signatures of sleep
Chen Song, Mélanie Boly, … Giulio Tononi·bioRxiv·Jan 26, 2019
- Automatic Wake-Sleep Stages Classification using Electroencephalogram Instantaneous Frequency and Envelope Tracking
M. Rahbar Alam, R. Sameni·bioRxiv·May 13, 2020
- Slow gamma oscillations in the mouse olfactory bulb are correlated with sniffing in the dark period
Ryosuke Mochizuki-Koike, Mami Okada, … Nobuyoshi Matsumoto·bioRxiv·Apr 25, 2023
- Characterizing Transition State in Mouse Vigilance with EEG-EMG Hypnodensity
Sadegh Rahimi, Monika Vadkertiová, … Thomas Fenzl·SLEEP AdvancesPeer-reviewed·Jan 1, 2026
- Pupil dynamics-derived sleep stage classification of a head-fixed mouse using a recurrent neural network
Goh Kobayashi, Kenji F. Tanaka, Norio Takata·The Keio Journal of MedicinePeer-reviewed·Jan 1, 2023
- Noninvasive Sleep Scoring in Mice using Electric Field Sensors
Heidi E. Kloefkorn, Lauren M. Aiani, … Shawn Hochman·bioRxiv·Oct 7, 2019