bioRxivNeurosciencePreprint
Differential gene expression in populations of sympathetic neurons purified from a neuropeptide Y reporter mouse
Abstract
Using gene chip methodology, we identified candidate genes differentially expressed by vasomotor and non-vasomotor sympathetic neurons in the superior cervical ganglion. Groups of 10 neurons were manually sorted after isolation from a transgenic neuropeptide Y (NPY) reporter mouse that expresses the humanized Renilla green fluorescent protein (GFP) under control of Npy promoter sequences. Anatomical analysis of GFP and NPY co-expression showed that 98% of GFP-positive neurons and 16% of GFP-negative neurons express NPY. The probability of contamination in sorted cell samples was therefore high. To minimize this problem, we screened amplified cDNA samples by the quantitative polymerase chain reaction. This approach identified 101 candidate genes preferentially expressed by GFP-positive neurons and 74 candidate genes preferentially expressed by GFP-negative neurons.
- organism: mouse
- assay: bulk RNA-seq
- research focus: differential expression
- approach: statistical model
- Citations
- 1
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Lineage-tracing reveals an expanded population of NPY neurons in the inferior colliculus
Marina Augusto Silveira, Yoani N. Herrera, … Michael T. Roberts·bioRxiv·Mar 27, 2024
- Sympathetic NPY controls glucose homeostasis, cold tolerance, and cardiovascular functions in mice
Raniki Kumari, Raluca Paşcalău, … Rejji Kuruvilla·Cell ReportsPeer-reviewed·Jan 21, 2024
- De novo expression of neuropeptide Y in sensory neurons does not contribute to peripheral neuropathic pain
Andrew H. Cooper, A.A. Nie, … Bradley Kenneth Taylor·Journal of PainPeer-reviewed·Apr 2, 2025
- Subcellular interactions of neuropeptide Y and corticotropin-releasing factor in the central nucleus of the amygdala in the mouse
Himavarsha Yerraguntla, Joy Onyekachi, … Beverly A.S. Reyes·NeurosciencePeer-reviewed·Feb 18, 2026
- nNOS-expressing neurons in the ventral tegmental area and substantia nigra pars compacta
Eleanor J. Paul, Eliza Kalk, … Mark A. Ungless·eNeuroPeer-reviewed·Sep 1, 2018
- Nuclear Factor-Y is a Pervasive Regulator of Neuronal Gene Expression
Pedro Moreira, Paul Papatheodorou, … Roger Pocock·Cell ReportsPeer-reviewed·Dec 1, 2023