Journal of Biological ChemistryBiophysicsPeer-reviewed journal article
An internal disulfide locks a misfolded aggregation-prone intermediate in cataract-linked mutants of human γD-crystallin
Eugene Serebryany, Jaie C. Woodard, Bharat V. Adkar, Mohammed Shabab, Jonathan A. King, Eugene I. Shakhnovich
Abstract
Considerable mechanistic insight has been gained into amyloid aggregation; however, a large class of non-amyloid protein aggregates are considered \"amorphous,\" and in most cases little is known about their mechanisms. Amorphous aggregation of {gamma}-crystallins in the eye lens causes a widespread disease of aging, cataract. We combined simulations and experiments to study the mechanism of aggregation of two {gamma}D-crystallin mutants, W42R and W42Q - the former a congenital cataract mutation, and the latter a mimic of age-related oxidative damage. We found that formation of an internal disulfide was necessary and sufficient for aggregation under physiological conditions. Two-chain all-atom simulations predicted that one non-native disulfide in particular, between Cys32 and Cys41, was likely to stabilize an unfolding intermediate prone to intermolecular interactions. Mass spectrometry and mutagenesis experiments confirmed the presence of this bond in the aggregates and its necessity for oxidative aggregation under physiological conditions in vitro. Mining the simulation data linked formation of this disulfide to extrusion of the N-terminal {beta}-hairpin and rearrangement of the native {beta}-sheet topology. Specific binding between the extruded hairpin and a distal {beta}-sheet, in an intermolecular chain reaction similar to domain swapping, is the most probable mechanism of aggregate propagation.
- organism: human
- assay: proteomics
- research focus: protein folding & dynamics
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Catalysis of cataract-associated human γD crystallin aggregation via dynamic disulfide exchange
E. Serebryany, S. Yu, … E. I. Shakhnovich·bioRxiv·Apr 12, 2018
- Dimerization of natively folded molecules drives misfolding and aggregation in Cys-depleted variants of cataract-associated human lens γD-crystallin
Yu Pu, Vanie Seecharan, … Eugene Serebryany·Journal of Biological ChemistryPeer-reviewed·Jun 9, 2026
- Conformational catalysis of cataract-associated aggregation in a human eye lens crystallin occurs via interface stealing.
E. Serebryany, W. M. Jacobs, … E. Shakhnovich·bioRxiv·Apr 29, 2019
- Double Domain Swapping in Human γC and γD Crystallin Drives Early Stages of Aggregation
- Cataract-prone variants of γD-crystallin populate a conformation with a partially unfolded N-terminal domain under native conditions
Sara E. Volz, Jadyn R. Malone, … Susan Marqusee·Proceedings of the National Academy of SciencesPeer-reviewed·Feb 3, 2025
- Accumulative deamidation of human lens protein γS-crystallin leads to partially unfolded intermediates with enhanced aggregation propensity
C. J. Vetter, D. Thorn, … K. J. Lampi·bioRxiv·Feb 21, 2020