JCO Oncology PracticeGenetic & Genomic MedicinePeer-reviewed journal article
Widespread adoption of precision anticancer therapies after implementation of pathologist-directed comprehensive genomic profiling across a large US health system
Alexa K. DowdelliD, Ryan MengiD, Ann VitaiD, Bela Bapat, Douglas Allen HanesiD, Shu‐Ching ChangiD, Lauren Harold, Mark Schmidt, Cliff WongiD, Hoifung PooniD, Brock Schroeder, Roshanthi K. WeerasingheiD, Rom S. LeidneriD, Walter John UrbaiD, Carlo Bruno BifulcoiD, Brian PieningiD
Abstract
Precision therapies and immunotherapies have revolutionized cancer care, resulting in significant gains in patient survival across tumor types. Despite this transformation in care, there is variability in the utilization of tumor molecular profiling. To standardize testing, we designed a pathologist-directed test ordering system at time of diagnosis utilizing a 523-gene DNA/RNA hybrid comprehensive genomic profiling (CGP) panel. We assessed actionability rates, therapy choices, and outcomes among 3,216 patients. 49% of cases had at least one actionable genomic biomarker-driven (GBD) approved and/or guideline-recommended targeted or immunotherapy and 53% of patients would have been eligible for a precision therapy clinical trial from three large basket trials. When assessing CGP versus an insilico 50 gene panel, 67% of tumors compared to 33% harbored actionable alterations. Among patients with 6-months or more of follow-up, over 52% received a targeted therapy or immunotherapy, versus 32% that received conventional chemotherapy alone, a phenomenon not previously observed. Statement of SignificanceThis study represents the first report where precision therapies (targeted and immunotherapy) have overtaken traditional cytotoxic treatments in the routine community-based care of advanced cancer patients, resulting in better overall survival. This represents an important milestone in the evolution and adoption of precision oncology and highlights the importance of CGP.
- organism: human
- assay: whole-exome sequencing
- assay: whole-genome sequencing
- research focus: variant calling
- research focus: differential expression
- research focus: drug response / drug discovery
- research focus: benchmarking
- approach: statistical model
- Citations
- 13
- FWCI
- 2.60
- Field percentile
- top 9%
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