Computational and Structural Biotechnology JournalBiophysicsPeer-reviewed journal article
Model-based Evaluation of Connexin Hemichannel Permeability
Tadas KraujalisiD, Lukas KersysiD, Andrius KriščiūnasiD, Dalia ČalnerytėiD, Auguste Cicinskaite, Lina KraujalienėiD, Vytas K. VerselisiD, Mindaugas ŠnipasiD
Abstract
Connexin (Cx) hemichannels represent a growing facet of Cx research. Hemichannels are hexamers of Cx subunits that are historically thought of as substrates of intercellular gap junction channels formed when two hemichannels from neighboring cells dock. Hemichannels, however, can function in the absence of docking and have been shown to play important roles in transmembrane signaling. There are 21 different Cx isoforms in humans and a host of disease-causing mutations have been identified. Although Cxs constitute large-pore channels, they can differ substantially in their conductance and permeability characteristics, thereby affecting the nature of signals that are transmitted. In this study, we present a methodology for quantifying and comparing the permeabilities of hemichannels formed by different Cx isoforms using a combination of fluorescence imaging, electrophysiological recordings and mathematical modeling. Fluorescence imaging, coupled with mathematical modeling based on Ficks law and/or the Goldman-Hodgkin-Katz current equation, enables estimation of tracer diffusion rates. These data are integrated with independently obtained electrophysiological measurements of hemichannel activity into a unified statistical model based on the likelihood ratio test. Simulation-based analyses demonstrate that our approach can reliably detect [~]2-fold differences in hemichannel permeability using datasets of moderate size. Crucially, this approach requires only a minimal amount of time-intensive electrophysiological recording, leveraging higher-throughout fluorescence measurements, which can be further streamlined using AI-based tools for automated cell detection and data extraction. We apply this method to compare the permeability of hemichannels formed by wild-type Cx26 and a pore-lining variant, Cx26*A49E. Our results show a significant increase in DAPI permeability in Cx26*A49E hemichannels, consistent with previous findings. This methodology can be extended to assess the permeabilities of other large-pore channels.
- organism: human
- assay: electrophysiology
- assay: fluorescence / live-cell microscopy
- research focus: differential expression
- approach: deep learning
- Citations
- 1
- FWCI
- 0.30
- Field percentile
- top 46%
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