The Carbohydrate Binding Module of TrCel7A Aids in Navigating the Complexity of Plant Cell Walls
Nerya ZexeriD, Alec Paradiso, Daguan NongiD, Parveen Kumar DeraliaiD, Paul DupreeiD, William Olaf HancockiD, Charles T. AndersoniD
Abstract
Efficient enzymatic deconstruction of plant cell walls is critical for utilization of lignocellulose biomass. Key enzymes in this process are cellobiohydrolases, a class of cellulases that processively degrade crystalline cellulose. Many cellobiohydrolases possess a carbohydrate-binding module (CBM), yet the importance of CBMs in substrate interaction remains unclear. Here, we use single-molecule fluorescence microscopy to investigate how CBM1 of Trichoderma reesei Cel7A influences enzyme binding and motility on cellulose substrates of varying complexity. We compare wild-type Cel7A with a truncated variant lacking CBM1 (Cel7A{Delta}CBM) on bacterial cellulose (BC), phosphoric acid swollen cellulose (PASC), delignified milkweed cellulose (MWC), and holocellulose nanofibrils (hCNF). While both variants showed similar steady-state binding densities on BC and PASC, Cel7A{Delta}CBM exhibited reduced binding on MWC and hCNF, with the greatest reduction on the hemicellulose-rich hCNF. Alkali removal of hemicellulose partially restored Cel7A{Delta}CBM binding, suggesting a role for CBM1 in substrate navigation and productive binding sites recognition. Kinetic analyses revealed that CBM1 enables a rapid binding mode absent in the truncated variant. Comparisons with isolated CBM3 further showed that CBMs are capable of fast substrate association. These findings demonstrate that CBMs enhance cellulase-substrate interactions by accelerating binding, enabling navigation of the complex environment of plant cell walls. Our results emphasize the importance of CBMs in natural cellobiohydrolase function and highlight their value in the design of improved cellulases for industrial biomass conversion.
02 /Specification & Classification
Click any tag to browse matching papersReproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Multiscale Characterization of Complex Binding Interactions of Cellulolytic Enzymes Highlights Limitations of Classical Approaches
S. P. S. Chundawat, B. Nemmaru, … S. Gnanakaran·bioRxiv·May 8, 2020
- Reduced type-A carbohydrate-binding module interactions to cellulose leads to improved endocellulase activity
B. Nemmaru, N. Ramirez, … S. P. S. Chundawat·bioRxiv·Jul 2, 2020
- Engineering and characterization of carbohydrate-binding modules to enable real-time imaging of cellulose fibrils biosynthesis in plant protoplasts
D. Jayachandran, P. Smith, … S. P. S. Chundawat·bioRxiv·Jan 2, 2023
- Oriented Display of Cello-Oligosaccharides for Pull-down Binding Assays to Distinguish Binding Preferences of Glycan Binding Proteins
Markus Hackl, Zachary Power, Shishir P. S. Chundawat·bioRxiv·Jan 26, 2023
- Acoustic Force Spectroscopy Reveals Subtle Differences in Cellulose Unbinding Behavior of Carbohydrate-Binding Modules
M. Hackl, E. V. Contrada, … S. P. S. Chundawat·bioRxiv·Sep 20, 2021
- Xylan inhibition of cellulase binding and processivity observed at single-molecule resolution
N. Zexer, A. Paradiso, … C. T. Anderson·bioRxiv·Jan 29, 2024