bioRxivGenomicsPreprint
Decrypting the phylogenetics history of EGF-CFC proteins Cripto and Cryptic.
Abstract
EGF-CFC proteins are obligate coreceptors for Nodal signaling and are thus required for gastrulation and left-right patterning. Species with multiple family members show evidence of specialization. For example, mouse Cripto is required for gastrulation, whereas Cryptic is involved in left-right patterning. However, the members of the family across model organisms have little sequence conservation beyond the EGF-CFC domain, posing challenges for determining their evolutionary history and functional conservation. In this study we outline the evolutionary history of the EGF-CFC family of proteins. We traced the EGF-CFC gene family from a single gene in the deuterostome ancestor through its expansion and functional specialization in tetrapods, and subsequent gene loss and translocation in eutherian mammals. Mouse Cripto and Cryptic, zebrafish Tdgf1, and all three Xenopus EGF-CFC genes (Tdgf1, Tdgf1.2 and Cripto.3) and are all descendants of the ancestral Tdgf1 gene. We propose that subsequent to the family expansion in tetrapods, Tdgf1B (Xenopus Tdgf1.2) acquired specialization in the left-right patterning cascade, and after its translocation in eutherians to a different chromosomal location, Cfc1/Cryptic has maintained that specialization.
- organism: mouse
- organism: zebrafish
- organism: human
- assay: protein sequence
- research focus: phylogenetics / evolution
- approach: statistical model
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A single amino acid change drives left- right asymmetry in Bilateria
Marta Truchado-García, Kimberly J. Perry, … Cristina Grande·bioRxiv·Oct 6, 2022
- Phylogenetic evidence for independent origins of GDF1 and GDF3 genes in amphibians and mammals
J. C. Opazo, K. Zavala·bioRxiv·Jun 16, 2018
- CTCF gradually acquires novel function modalities during bilaterian evolution
Artem R. Nurislamov, Andrey Popov, … Veniamin Fishman·bioRxiv·Oct 23, 2026
- Evolution of CTCF underlies the establishment of loop extrusion as a predominant chromatin folding mechanism in vertebrates
Liene Astica, Rafael D. Acemel, … Darío G. Lupiáñez·bioRxiv·Oct 23, 2026
- Less, but more: new insights from appendicularians on chordate Fgf evolution and the divergence of tunicate lifestyles.
Gaspar Sánchez-Serna, Jordi Badia‐Ramentol, … Cristian Cañestro·Molecular Biology and EvolutionPeer-reviewed·Dec 17, 2024
- Downstream effects of the ''Less, but More'' Fgf signaling in Oikopleura dioica: Fgf receptor expansion and RTK pathway simplification.
Gaspar Sánchez-Serna, Paula Bujosa, … Cristian Cañestro·bioRxiv·Dec 11, 2025