bioRxivCell BiologyPreprint
Analysis of patient data reveals novel cancer-relevant functions for GCN2/eIF2αK4
Vilte StonyteiD, Christina Sæten FjeldboiD, Priyanka Swaminathan, Prabin Sharma HumagainiD, Laura Marian Valencia-Pesqueira, Lilian Lindbergsengen, Heidi LyngiD, Beáta GrallertiD
Abstract
Numerous studies have shown that high GCN2 levels correlate with poor survival in a number of cancers. GCN2 has been known for over thirty years as a stress-response kinase, which phosphorylates the translation-initiation factor eIF2, and thereby contributes to reprogramming of translation. Here we performed correlation analyses of GCN2 expression and that of other genes in a patient-derived sample set of cervical cancer samples. We found correlations not only with genes involved in stress responses, but also with genes involved in mitosis and cell migration. Our functional analyses confirmed that these correlations indeed reveal novel functions. Furthermore, our analyses of growth benefits associated with elevated GCN2 levels suggest that the novel functions can contribute to aggressive disease in cancers with high GCN2 levels.
- organism: human
- assay: bulk RNA-seq
- research focus: differential expression
- approach: statistical model
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Loss of EIF4G2 Mediates Aggressiveness in Distinct Human Endometrial Cancer Subpopulations with Poorer Survival Outcome in Patients
S. Meril, M. Muhlbauer Avni, … A. Kimchi·bioRxiv·Sep 14, 2023
- An integrated stress response-independent role of GCN2 prevents excessive ribosome biogenesis and mRNA translation
Mónica Román-Trufero, Istvan T. Kleijn, … Holger W. Auner·Life Science AlliancePeer-reviewed·Mar 3, 2025
- GCN2 eIF2 kinase promotes prostate cancer by maintaining amino acid homeostasis
R. Cordova, J. Misra, … K. A. Staschke·bioRxiv·Jun 17, 2022
- Light dependent activation of the GCN2 kinase under cold and salt stress is mediated by the photosynthetic status of the chloroplast
A. Lokdarshi, P. W. Morgan, … A. G. von Arnim·bioRxiv·Nov 21, 2019
- RNF25 restrains GCN2 hyperactivation to sustain protein synthesis and cell proliferation in response to RNA damage
Antonia S. Seidel, Lucia Nemcekova, … Peter Haahr·bioRxiv·Mar 24, 2026
- Loss-of-function cancer-associated mutations in the EIF4G2 non-canonical translation initiation factor
S. Meril, M. Bhalsen, … A. Kimchi·bioRxiv·Aug 22, 2023