bioRxivBioinformaticsPreprint
FusionCatcher - a tool for finding somatic fusion genes in paired-end RNA-sequencing data
Daniel Nicorici, Mihaela Şatalan, Henrik Edgren, Sara Kangaspeska, Astrid MurumägiiD, Olli KallioniemiiD, Sami Virtanen, Olavi Kilkku
Abstract
FusionCatcher is a software tool for finding somatic fusion genes in paired-end RNA-sequencing data from human or other vertebrates. FusionCatcher achieves competitive detection rates and real-time PCR validation rates in RNA-sequencing data from tumor cells. Fusion-Catcher is available at http://code.google.com/p/fusioncatcher/.
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