bioRxivSystems BiologyPreprint
Theoretical Design of Paradoxical Signaling-Based Synthetic Population Control Circuit in E. coli
Abstract
We have developed a mathematical framework to analyze the cooperative control of cell population homeostasis via paradoxical signaling in synthetic contexts. Paradoxical signaling functions through quorum sensing (where cells produce and release a chemical signal as a function of cell density). Precisely, the same quorum sensing signal provides both positive (proliferation) and negative (death) feedback in different signal concentration regimes. As a consequence, the relationship between intercellular quorum sensing signal concentration and net growth rate (cell proliferation minus death rates) can be non-monotonic. This relationship is a condition for robustness to certain cell mutational overgrowths and allows for increased stability in the presence of environmental perturbations. Here, we explore stability and robustness of a conceptualized synthetic circuit. Furthermore, we asses possible design principles that could exist among a subset of paradoxical circuit implementations. This analysis sparks the development a bio-molecular control theory to identify ideal underlying characteristics for paradoxical signaling control systems.
- Citations
- 2
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Population regulation in microbial consortia using dual feedback control
Xinying Ren, Ania-Ariadna Baetica, … Richard M. Murray·IEEE Conference on Decision and Control (CDC)Peer-reviewed·Dec 1, 2017
- Synthetic mammalian signaling circuits for robust cell population control
Yitong Ma, Mark W. Budde, … Michael B. Elowitz·CellPeer-reviewed·Mar 1, 2022
- Layered Feedback Control Improves Robust Functionality across Heterogeneous Cell Populations
Xinying Ren, Richard M. Murray·bioRxiv·Mar 24, 2020
- Quorum-sensing synchronization of synthetic toggle switches: A design based on monotone dynamical systems theory
Evgeni Nikolaev, Eduardo Sontag·PLOS Computational BiologyPeer-reviewed·Apr 29, 2016
- Analysis of Circuits for Dosage Control in Microbial Populations
Sophie Jean Walton, Samuel E. Clamons, Richard M. Murray·bioRxiv·Dec 18, 2020
- Regulating population density through antithetic feedback control of cell growth
Giovanni Campanile, Vittoria Martinelli, … Davide Fiore·IFAC Journal of Systems and ControlPeer-reviewed·Feb 9, 2026