Biology of Sex DifferencesNeurosciencePeer-reviewed journal article
Adult sex change leads to extensive forebrain reorganization in clownfish
Coltan G. ParkeriD, George W. GruenhageniD, Brianna E. Hegarty, Abigail R. Histed, Jeffrey Todd StreelmaniD, Justin S. RhodesiD, Zachary V. JohnsoniD
Abstract
Sexual differentiation of the brain occurs in all major vertebrate lineages but is not well understood at a molecular and cellular level. Unlike most vertebrates, sex-changing fishes have the remarkable ability to change reproductive sex during adulthood in response to social stimuli, offering a unique opportunity to understand mechanisms by which the nervous system can initiate and coordinate sexual differentiation. This study explores sexual differentiation of the forebrain using single nucleus RNA-sequencing in the anemonefish Amphiprion ocellaris, producing the first cellular atlas of a sex-changing brain. We uncover extensive sex differences in cell type-specific gene expression, relative proportions of cells, baseline neuronal excitation, and predicted inter-neuronal communication. Additionally, we identify the cholecystokinin, galanin, and estrogen systems as central molecular axes of sexual differentiation. Supported by these findings, we propose a model of neurosexual differentiation in the conserved vertebrate social decision-making network spanning multiple subtypes of neurons and glia, including neuronal subpopulations within the preoptic area that are positioned to regulate gonadal differentiation. This work deepens our understanding of sexual differentiation in the vertebrate brain and defines a rich suite of molecular and cellular pathways that differentiate during adult sex change in anemonefish. Significance StatementThis study provides key insights into brain sex differences in sex-changing anemonefish (Amphiprion ocellaris), a species that changes sex in adulthood in response to the social environment. Using single nucleus RNA-sequencing, the study provides the first brain cellular atlas showing sex differences in two crucial reproductive areas: the preoptic area and telencephalon. The research identifies notable sex-differences in cell-type proportions and gene expression, particularly in radial glia and glutamatergic neurons that co-express the neuropeptide cholecystokinin. It also highlights differences in preoptic area neurons likely involved in gonadal regulation. This work deepens our understanding of sexual differentiation of the brain in vertebrates, especially those capable of adult sex change, and illuminates key molecular and cellular beginning and endpoints of the process.
- organism: zebrafish
- assay: scRNA-seq
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- research focus: cell-cell communication
- approach: statistical model
- Citations
- 7
- FWCI
- 1.98
- Field percentile
- top 15%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A Role for Exaptation in Sculpting Sexually Dimorphic Brains from Shared Neural Lineages.
Aaron M. Allen, Megan C. Neville, … Stephen F. Goodwin·bioRxiv·Jun 4, 2025
- Microglia and Chek2 contribute to sex-specific organization of the adult zebrafish brain
Paloma Bravo, Florence L. Marlow·bioRxiv·Aug 15, 2025
- Gonadal remodelling in socially driven sex change is associated with novel and known sex genes, epigenetic reprogramming, and inflammation-mediated apoptosis.
Chloé A. van der Burg, Alexander Goikoetxea, … Neil J. Gemmell·bioRxiv·Sep 8, 2026
- Decoding sexual dimorphism of the sex-shared nervous system at single-neuron resolution
Rizwanul Haque, Hagar Setty, … Meital Oren‐Suissa·Science AdvancesPeer-reviewed·Jul 11, 2025
- Transcriptomic and functional characterization indicate sexual dimorphism of discrete circadian neuron subtypes
Melina Pérez Torres, Rui han Jiang, … Michael Rosbash·bioRxiv·Mar 23, 2026
- Novel Behavioral Assays Reveal Sex Specific Behavioral Syndromes in Anemonefish
Gabriel J. Graham, Isabella M. Wilton, … Justin S. Rhodes·Journal of Fish BiologyPeer-reviewed·Feb 18, 2025