BMC BioinformaticsSystems BiologyPeer-reviewed journal article
IMMAN: an R/Bioconductor package for Interolog protein network reconstruction, Mapping and Mining ANalysis
Minoo AshtianiiD, Payman NickchiiD, Soheil JahangiriiD, Abdollah Safari, Mehdi MirzaieiD, Mohieddin JafariiD
Abstract
IMMAN is a software for reconstructing Interolog Protein Network (IPN) by integrating several Protein-protein Interaction Networks (PPIN). Users can unify different PPINs to mine conserved common network among species. IMMAN helps to retrieve IPNs with different degrees of conservation to engage for protein function prediction analysis based on protein networks.\n\nAvailabilityIMMAN is freely available at https://bioconductor.org/packages/IMMAN, http://profiles.bs.ipm.ir/softwares/IMMAN/.\n\nContactmirzie@ipm.ir, mjafari@ipm.ir, asafari@sfu.ca\n\nSupplementary informationSupplementary data are available online.
- assay: protein sequence
- research focus: software / tool
- research focus: protein structure prediction
- research focus: protein design
- approach: statistical model
- approach: benchmark study
- Citations
- 2
- FWCI
- 0.17
- Field percentile
- 43th percentile
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