Author

A. Afanassiev

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:scRNA-seq· 2 Organism:Arabidopsis· 1 Approach:comparative / phylogenetic analysis· 1 Approach:experimental assay· 1 Organism:multiple species· 1

Frequent Co-Authors

G. Schiebinger· 2 shared L. Greenstreet· 2 shared A. Berrio· 1 shared A. Brosnan· 1 shared A. J. Massri· 1 shared C.-W. Hsu· 1 shared D. R. McClay· 1 shared E. Russinova· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersEvolutionary Biology

G. Schiebinger

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2 papers

Recent·Most cited

Single-cell transcriptomics reveals evolutionary reconfiguration of embryonic cell fate specification in the sea urchin Heliocidaris erythrogramma

A. J. Massri, A. Berrio, A. Afanassiev, L. Greenstreet, K. Pipho, M. Byrne, G. Schiebinger, D. R. McClay, G. A. Wray

The paper uses single-cell RNA sequencing to compare embryonic development in two sea urchin species, identifying evolutionary changes in cell fate specification and signaling.

bioRxiv · Apr 30, 2024 · PreprintEvolutionary Biology

Brassinosteroid gene regulatory networks at cellular resolution

T. M. Nolan, N. Vukasinovic, C.-W. Hsu, J. Zhang, I. Vanhoutte, R. Shahan, I. W. Taylor, L. Greenstreet, M. Heitz, A. Afanassiev, P. Wang, P. Szekely, A. Brosnan, Y. Yin, G. Schiebinger, , P. N. Benfey

The paper identifies BR-responsive gene expression in Arabidopsis root cells using single-cell RNA-sequencing and reveals HAT7 and GTL1 as transcription factors regulating cell elongation.

bioRxiv · Sep 16, 2022 · PreprintPlant Biology