Author

R. Shahan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:Arabidopsis· 2 Approach:experimental assay· 2 Assay:scRNA-seq· 2 Research Focus:clustering· 1 Research Focus:development & morphogenesis· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

C.-W. Hsu· 2 shared I. W. Taylor· 2 shared P. N. Benfey· 2 shared T. M. Nolan· 2 shared U. Ohler· 2 shared A. Afanassiev· 1 shared A. Brosnan· 1 shared A. Eichhorn· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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2 shared papersPlant Biology

C.-W. Hsu

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Author profile →

3 papers

Recent·Most cited

Brassinosteroid gene regulatory networks at cellular resolution

T. M. Nolan, N. Vukasinovic, C.-W. Hsu, J. Zhang, I. Vanhoutte, R. Shahan, I. W. Taylor, L. Greenstreet, M. Heitz, A. Afanassiev, P. Wang, P. Szekely, A. Brosnan, Y. Yin, G. Schiebinger, , P. N. Benfey

The paper identifies BR-responsive gene expression in Arabidopsis root cells using single-cell RNA-sequencing and reveals HAT7 and GTL1 as transcription factors regulating cell elongation.

bioRxiv · Sep 16, 2022 · PreprintPlant Biology

Genomic characterization of three novel Desulfobacterota classes expand the metabolic and phylogenetic diversity of the Phylum

C. L. Murphy, J. Biggerstaff, A. Eichhorn, E. Ewing, R. Shahan, D. Soriano, S. Stewart, K. VanMol, R. Walker, P. Walters, M. S. Elshahed, N. H. Youssef

This study characterizes 30 genomes from three novel Desulfobacterota classes, expanding their metabolic and phylogenetic diversity across various environments.

bioRxiv · Mar 22, 2021Microbiology

A single cell Arabidopsis root atlas reveals developmental trajectories in wild type and cell identity mutants

R. Shahan, C.-W. Hsu, T. M. Nolan, B. J. Cole, I. W. Taylor, A. H. C. Vlot, P. N. Benfey, U. Ohler

The paper constructs a single-cell atlas of Arabidopsis root development and identifies an alternative pathway for endodermal identity specification in mutants.

bioRxiv · Jun 29, 2020 · PreprintPlant Biology