Author

A. B. Fogo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Cell Biology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Organism:human· 4 Assay:imaging· 4 Approach:deep learning· 2 Assay:spatial transcriptomics· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

J. M. Spraggins· 3 shared N. H. Patterson· 3 shared E. K. Neumann· 2 shared E. L. Pingry· 2 shared E. S. Rivera· 2 shared H. Yang· 2 shared J. L. Allen· 2 shared L. G. Migas· 2 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBiochemistry

J. M. Spraggins

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

ComPRePS: Unlocking Scalable AI Analysis for Computational Renal Pathology

A. S. Paul, L. A. Rodrigues, S. Katari Chaluva Kumar, D. Manthey, S. Boarder, C. Pardinhas, C. Pimenta, V. Sousa, A. Figueiredo, R. Alves, B. A. Santo, W. Dunklin, S. Devarasetty, H. Abdelazim, A. B. Fogo, , P. Sarder

ComPRePS improves renal pathology analysis by automating WSI processing and AI-assisted interpretation, enhancing precision and interobserver agreement in key lesion assessments.

bioRxiv · Mar 21, 2024 · PreprintPathology

Revealing In Situ Molecular Profiles of Glomerular Cell Types and Substructures with Integrated Imaging Mass Spectrometry and Multiplexed Immunofluorescence Microscopy

A. B. Esselman, F. A. Moser, L. Tideman, L. G. Migas, K. V. Djambazova, M. E. Colley, E. L. Pingry, N. H. Patterson, M. A. Farrow, H. Yang, A. B. Fogo, M. de Caestecker, R. Van de Plas, J. M. Spraggins

This paper integrates MALDI IMS and MxIF microscopy to analyze lipid and molecular profiles of glomerular cell types and substructures in human kidney tissue.

bioRxiv · Feb 21, 2024 · PreprintBiochemistry

A Lipid Atlas of the Human Kidney

M. A. Farrow, L. E. M. Tideman, E. K. Neumann, L. G. Migas, N. H. Patterson, M. E. Colley, J. L. Allen, E. L. Pingry, M. Dufresne, H. Yang, M. Brewer, E. S. Rivera, C. E. Romer, K. Djambazova, K. Sharman, , J. M. Spraggins

The paper constructs a spatio-molecular lipid atlas of the human kidney using multimodal imaging and machine learning, revealing lipid profile variations related to sex and BMI.

bioRxiv · Apr 7, 2022Biochemistry

Highly Multiplexed Immunofluorescence of the Human Kidney using Co-Detection by Indexing (CODEX)

E. K. Neumann, E. S. Rivera, N. H. Patterson, J. L. Allen, M. Brewer, M. deCaestecker, A. B. Fogo, R. M. Caprioli, J. M. Spraggins

This paper applies CODEX multiplexed immunofluorescence to visualize 23 antigens in human kidney tissue, identifying major cell types and substructures with high resolution.

bioRxiv · Dec 4, 2020Cell Biology