Author

A. C. Freise

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 6

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 4 Research Focus:clustering· 3 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:database / resource· 1

Frequent Co-Authors

J. Moberg Parker· 5 shared A. Kapinos· 4 shared K. Reddi· 4 shared C. Torres· 3 shared A. Alag· 1 shared A. Bernardino· 1 shared A. E. Garcia-Vedrenne· 1 shared A. Hakim· 1 shared

Activity by Year

2020-2022 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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5 shared papersMicrobiology

J. Moberg Parker

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Characterization of Genomic Diversity In Bacteriophages Infecting Rhodococcus

D. R. Garza, D. Di Blasi, J. A. Bruns, B. Empson, M. Ghannam, I. Light, S. Castillo, B. Quijada, M. Zorawik, A. E. Garcia-Vedrenne, A. C. Freise

This study characterizes the genomic diversity of 57 Rhodococcus-infecting bacteriophages, revealing clustering patterns and genomic features such as integrase and repressor genes.

bioRxiv · Nov 23, 2022 · PreprintMicrobiology

Exploring Genomic Conservation in Actinobacteriophages with Small Genomes

V. Y. Tse, H. Liu, A. Kapinos, C. Torres, M. Rahman, A. S. Vargas, B. C. S. Cayabyab, L. G. Nakashima, S. N. Fett, K. Reddi, J. Moberg Parker, A. C. Freise

This study examines genomic conservation in small actinobacteriophages, finding significant gene content similarity and conserved phams across different clusters and hosts.

bioRxiv · Feb 5, 2022 · PreprintMicrobiology

Complete Genome Sequences of Nine Cluster A Mycobacteriophages: AgentM, Ajay, Aragog, Archetta, ForGetIt, Koko, Ph8s, Phlorence, and Wilkins

R. M. Lipman, A. C. Freise, A. Kapinos, C. Torres, K. Reddi, J. Moberg Parker

The paper reports the genome sequences of nine novel mycobacteriophages and classifies them into Cluster A based on genomic analysis.

bioRxiv · Nov 29, 2020 · PreprintMicrobiology

Novel Cluster AZ Arthrobacter phages Powerpuff, Lego, and YesChef exhibit close functional relationships with Microbacterium phages

A. Kapinos, P. Aghamalian, E. Capehart, A. Alag, H. Angel, E. Briseno, E. Farag, H. Foster, A. Hakim, D. Hernandez-Casas, C. Huang, D. Lam, M. Mendez, A. Min, N. Nguyen, , J. Moberg Parker

This study identifies three novel Arthrobacter phages that show close functional relationships with Microbacterium phages, highlighting the need for multiple metrics to assess phage relatedness.

bioRxiv · Nov 21, 2020 · PreprintMicrobiology

BlueFeather, the singleton that wasn't: Shared gene content analysis supports expansion of Arthrobacter phage cluster FE

S. Demo, A. Kapinos, A. Bernardino, K. Guardino, B. Hobbs, K. Hoh, E. Lee, I. Vuong, K. Reddi, A. C. Freise, J. Moberg Parker

The paper reclassifies the Arthrobacter phage BlueFeather from a singleton to Cluster FE based on shared gene content analysis, revealing horizontal gene transfer and expanding the cluster.

bioRxiv · Aug 15, 2020Microbiology

Nine Novel Cluster E Mycobacteriophages Isolated from Soil

J. M. Gaballa, A. C. Freise, J. Moberg Parker

The paper isolates nine novel Cluster E mycobacteriophages from soil and describes their genomic features and structural characteristics.

bioRxiv · Mar 5, 2020 · PreprintMicrobiology