Author

D. R. Garza

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Organism:bacteria (other)· 2 Assay:bulk RNA-seq· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell signaling & trafficking· 1

Frequent Co-Authors

A. Boleij· 3 shared B. E. Dutilh· 3 shared A. C. Freise· 1 shared A. E. Garcia-Vedrenne· 1 shared A. Geirnaert· 1 shared A. Krzynowek· 1 shared B. Empson· 1 shared B. Liu· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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3 shared papersMicrobiology

A. Boleij

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Starvation responses impact interaction dynamics of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis

B. Liu, D. R. Garza, D. Gonze, A. Krzynowek, K. Simoens, K. Bernaerts, A. Geirnaert, K. Faust

This study examines how nutrient scarcity affects the interaction dynamics between Bacteroides thetaiotaomicron and Roseburia intestinalis using in vitro experiments and computational modeling.

bioRxiv · Feb 2, 2023 · PreprintMicrobiology

Characterization of Genomic Diversity In Bacteriophages Infecting Rhodococcus

D. R. Garza, D. Di Blasi, J. A. Bruns, B. Empson, M. Ghannam, I. Light, S. Castillo, B. Quijada, M. Zorawik, A. E. Garcia-Vedrenne, A. C. Freise

This study characterizes the genomic diversity of 57 Rhodococcus-infecting bacteriophages, revealing clustering patterns and genomic features such as integrase and repressor genes.

bioRxiv · Nov 23, 2022 · PreprintMicrobiology

Optimized DNA isolation method for microbiome analysis of human tissues

C. E. Bruggeling, D. R. Garza, S. Achouiti, W. Mes, B. E. Dutilh, A. Boleij

The paper presents a DNA isolation method that reduces host DNA interference in human tissue microbiome analysis, enabling accurate microbial profiling.

MicrobiologyOpen · Jun 1, 2021Peer-reviewedMicrobiology

Nutrition or nature: disentangling the complex forces shaping prokaryote pan-genomes

D. R. Garza, F. A. B. von Meijenfeldt, B. van Dijk, A. Boleij, M. Huynen, B. E. Dutilh

The paper disentangles the forces shaping prokaryote pan-genomes by simulating metabolic reaction loss in different environments and identifying reactions constrained by nutrition or nature.

bioRxiv · Dec 14, 2020 · PreprintEvolutionary Biology

Growth rate alterations of human colorectal cancer cells by 157 gut bacteria

R. Taddese, D. R. Garza, L. N. Ruiter, M. I. de Jonge, C. Belzer, S. Aalvink, I. D. Nagtegaal, B. E. Dutilh, A. Boleij

This study screens over 150 gut bacteria to determine their effects on colorectal cancer cell growth, identifying strain-level differences and specific genes associated with growth modulation.

bioRxiv · Dec 14, 2019Microbiology