Author

A. S. d. Souza

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 3 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Approach:mechanistic / dynamical model· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Organism:virus· 1

Frequent Co-Authors

C. R. Guzzo· 3 shared R. F. d. Souza· 2 shared B. A. P. Bismara· 1 shared C. Carvalho· 1 shared C. S. Farah· 1 shared E. J. Vicente· 1 shared J. O. Pereira· 1 shared M. Yonamine· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersBiophysics

C. R. Guzzo

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BiophysicsbioRxivMar 6, 2023

Cooperative and structural relationships of the trimeric Spike with infectivity and antibody escape of the strains Delta (B.1.617.2) and Omicron (BA.2, BA.5, and BQ.1)

A. S. d. Souza, R. F. d. Souza, C. R. Guzzo

This study simulates the trimeric Spike protein of SARS-CoV-2 variants to analyze how specific mutations affect infectivity and antibody resistance.

DOI 10.1007/s10822-023-00534-0

experimental assayhost-pathogen & immune response

BiophysicsbioRxivFeb 14, 2022

Molecular dynamics simulations of the Spike trimeric ectodomain of the SARS-CoV-2 Omicron variant: structural relationships with infectivity, evasion to immune system and transmissibility

V. M. d. F. Amorim, R. F. de Souza, A. S. d. Souza, C. R. Guzzo

The paper uses molecular dynamics simulations to analyze structural differences between SARS-CoV-2 Spike proteins of the Omicron and wild-type variants, linking conformational flexibility to increased infectivity, immune evasion, and transmissibility.

DOI 10.1080/07391102.2022.2142296

virusmechanistic / dynamical model

BiochemistrybioRxivPreprintDec 16, 2020

Molecular and functional basis of a novel Amazonian Dark Earth Esterase 1 (Ade1) with hysteresis behavior and quorum-quenching activity

T. G. C. Vinces, A. S. d. Souza, C. Carvalho…·C. R. Guzzo

The paper identifies and characterizes a novel esterase, Ade1, from Amazonian Dark Earth soils, revealing its hysteresis behavior and quorum-quenching activity through molecular dynamics simulations.

DOI 10.1101/2020.12.16.421545

metagenomicsstatistical model