Author

A. S. Khan

Institute of Bioinformatics and Applied Biotechnology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 2 Genomics· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1

Frequent Co-Authors

A. A. Adesiyun· 1 shared A. Hameed· 1 shared B. Habib· 1 shared B. Pandav· 1 shared D. Mohan· 1 shared Gaurav SharmaiD· 1 shared K. Georges· 1 shared K. H. M. Siddique· 1 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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Curved chords = mutual co-authorship

1 shared paperEcology

A. A. Adesiyun

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Waning grasslands: a quantitative temporal evaluation of the grassland habitats across human-dominated upper Gangetic Plains, north India

S. Paul, S. Saha, P. Nigam, S. Z. Ali, N. Page, A. S. Khan, M. Kumar, B. Habib, D. Mohan, B. Pandav, S. Mondol

The paper quantitatively assesses the decline of grassland habitats in the upper Gangetic Plains over 30 years, finding a 57% reduction mainly due to conversion to croplands.

bioRxiv · Oct 10, 2021 · PreprintEcology

Genomic comparison of eight closed genomes of multidrug resistant Salmonella enterica strains isolated from broiler farms and processing plants in Trinidad and Tobago

M. Maguire, A. S. Khan, A. A. Adesiyun, K. Georges, N. Gonzalez-Escalona

The paper closes genomes of eight multidrug-resistant Salmonella enterica strains using long and short read sequencing, identifying AMR genes and plasmids associated with resistance.

bioRxiv · May 20, 2021Ecology

Dynamic tracking of variant frequencies depicts the evolution of mutation sites amongst SARS-CoV-2 genomes from India

Shenu B. Hudson, Vaishnavi Kolte, A. S. Khan, Gaurav Sharma

The paper tracks mutation frequency changes in 2,457 SARS-CoV-2 strains from India over seven months, identifying 19 variants with increasing or decreasing mutational probabilities.

Journal of Medical Virology · Dec 24, 2020Peer-reviewedGenomics

Agronomic, physiological and molecular characterization of rice mutants revealed key role of ROS and catalase in high temperature stress tolerance

S. A. Zafar, A. Hameed, M. Ashraf, A. S. Khan, Z. u. Qamar, X. Li, K. H. M. Siddique

This study identifies heat-tolerant rice mutants and key molecular factors like catalase and ROS regulation that contribute to high temperature stress tolerance.

bioRxiv · Aug 20, 2019 · PreprintPhysiology