Author

A. V. Reyes

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 5

Signature Assays, Organisms & Methods

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Assay:proteomics· 4 Organism:Arabidopsis· 3 Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:protein folding & dynamics· 2 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

R. Shrestha· 4 shared S.-L. Xu· 4 shared P. R. Baker· 2 shared R. J. Chalkley· 2 shared C. Zhang· 1 shared D. Byun· 1 shared J. Powers· 1 shared R. Zavaliev· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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4 shared papersPlant Biology

R. Shrestha

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5 papers

Recent·Most cited

Impact of alternative splicing on Arabidopsis proteome

A. V. Reyes, C. Zhang, S. S. Karunadasa, R. Shrestha, T. S. Grismer, D. Byun, S. Xu

This study provides large-scale proteomic evidence that alternative splicing isoforms are translated in plants, showing their impact on protein abundance and plant growth.

bioRxiv · Feb 29, 2024Plant Biology

Next-generation mapping of the salicylic acid signaling hub and transcriptional cascade

J. Powers, X. Zhang, A. V. Reyes, R. Zavaliev, S.-L. Xu, X. Dong

This study maps the NPR1 signaling hub and transcriptional cascade in plants using TurboID and greenCUT&RUN, revealing chromatin remodeling and histone demethylation in SA-induced resistance.

bioRxiv · Jan 3, 2024Plant Biology

SECRET AGENT O-GlcNAcylates hundreds of proteins involved in diverse cellular processes in Arabidopsis

R. Shrestha, S. Karunadasa, T. Grismer, A. V. Reyes, S.-L. Xu

The paper identifies 436 O-GlcNAcylated proteins in Arabidopsis, revealing their involvement in diverse cellular processes and crosstalk with O-fucosylation.

bioRxiv · Sep 16, 2023Plant Biology

Application of Parallel Reaction Monitoring in 15N labeled Samples for Quantification

A. V. Reyes, R. Shrestha, P. R. Baker, R. J. Chalkley, S.-L. Xu

This study applies parallel reaction monitoring to 15N labeled samples to improve quantification accuracy in proteomics, particularly for low abundance proteins.

bioRxiv · Dec 1, 2021Plant Biology

15N metabolic labeling quantification workflow in Arabidopsis using Protein Prospector

R. Shrestha, A. V. Reyes, P. R. Baker, Z.-Y. Wang, R. J. Chalkley, S.-L. Xu

The paper introduces a 15N metabolic labeling workflow for protein quantification in Arabidopsis using Protein Prospector, highlighting key features for accurate analysis.

bioRxiv · Nov 30, 2021Plant Biology