Author
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
12 papers
Recent·Most cited
J. Powers, X. Zhang, A. V. Reyes, R. Zavaliev, S.-L. Xu, X. Dong
This study maps the NPR1 signaling hub and transcriptional cascade in plants using TurboID and greenCUT&RUN, revealing chromatin remodeling and histone demethylation in SA-induced resistance.
bioRxiv · Jan 3, 2024Plant Biology
R. G. Kim, W. Huang, J. Findinier, F. Bunbury, P. Redekop, R. Shrestha, T. Grismer, J. Vilarrasa-Blasi, R. E. Jinkerson, N. Fakhimi, F. Fauser, M. C. Jonikas, M. Onishi, S.-L. Xu, A. R. Grossman
The paper identifies RMT2 as a chloroplast methyltransferase homolog involved in photosystem I biogenesis in Chlamydomonas reinhardtii through a high-throughput O2 sensitivity screen.
bioRxiv · Dec 21, 2023 · PreprintPlant Biology
Z. Shao, L. Bian, S. K. Ahmadi, T. J. Daniel, M. A. Belmonte, J. G. Burns, P. Kotla, Y. Bi, Z. Shen, S.-L. Xu, Z.-Y. Wang, S. P. Briggs, H. Qiao
This study identifies the nuclear pyruvate dehydrogenase complex (PDC) as a key regulator of histone acetylation and transcription during ethylene response in plants.
bioRxiv · Oct 25, 2023Plant Biology
Z. Zhang, H. Zhang, E. Gonzalez, T. Grismer, S.-L. Xu, Z.-Y. Wang
This study identifies UPL3 as an E3 ubiquitin ligase that promotes BZR1 degradation under sugar starvation, leading to growth arrest and improved seedling survival in Arabidopsis.
bioRxiv · Oct 18, 2023Plant Biology
A. Chaudhary, Y.-C. Hsiao, F.-L. J. Yeh, H.-M. Wu, A. Y. Cheung, S.-L. Xu, Z.-Y. Wang
This study shows brassinosteroid recruits FERONIA to monitor cell wall integrity and prevent cell rupture during cell expansion in Arabidopsis.
bioRxiv · Oct 1, 2023Plant Biology
R. Shrestha, S. Karunadasa, T. Grismer, A. V. Reyes, S.-L. Xu
The paper identifies 436 O-GlcNAcylated proteins in Arabidopsis, revealing their involvement in diverse cellular processes and crosstalk with O-fucosylation.
bioRxiv · Sep 16, 2023Plant Biology
A. Liu, A. Mair, J. Matos, M. Vollbrecht, S.-L. Xu, D. Bergmann
This study investigates how transcription factors and epigenetic machinery regulate stomatal development in Arabidopsis by analyzing scRNA-seq and ChIP-seq data, revealing chromatin remodeling mechanisms.
bioRxiv · Aug 23, 2023 · PreprintPlant Biology
C. H. Park, Y. Bi, J.-H. Youn, S.-H. Kim, J.-G. Kim, N. Xu, R. Shrestha, A. L. Burlingame, S.-L. Xu, M. B. Mudgett, S.-K. Kim, T.-W. Kim, Z.-Y. Wang
This study shows that BSU1 phosphatase uses different phosphorylation sites to transduce signals from brassinosteroid and flagellin receptors in plants.
bioRxiv · May 2, 2022Plant Biology
A. V. Reyes, R. Shrestha, P. R. Baker, R. J. Chalkley, S.-L. Xu
This study applies parallel reaction monitoring to 15N labeled samples to improve quantification accuracy in proteomics, particularly for low abundance proteins.
bioRxiv · Dec 1, 2021Plant Biology
R. Shrestha, A. V. Reyes, P. R. Baker, Z.-Y. Wang, R. J. Chalkley, S.-L. Xu
The paper introduces a 15N metabolic labeling workflow for protein quantification in Arabidopsis using Protein Prospector, highlighting key features for accurate analysis.
bioRxiv · Nov 30, 2021Plant Biology
C. P. Wigington, J. Roy, N. P. Damle, V. K. Yadav, C. Blikstad, E. Resch, C. J. Wong, D. R. Mackay, J. T. Wang, I. Krystkowiak, D. A. Bradburn, E. Tsekitsidou, S. H. Hong, M. A. Kaderali, S.-l. Xu, , M. S. Cyert
The paper identifies calcineurin (CN) substrates and interactors using a combination of experimental and computational methods, revealing novel roles for CN in regulating nuclear pore complex proteins.
bioRxiv · Mar 26, 2020Cell Biology
T.-W. Kim, C. H. Park, C.-C. Hsu, J.-Y. Zhu, Y. Hsiao, T. Branon, S.-L. Xu, A. Y. Ting, Z.-Y. Wang
This study uses TurboID-mediated proximity labeling to map the GSK3 kinase signaling network in Arabidopsis, identifying hundreds of BIN2-interacting proteins.
bioRxiv · May 13, 2019Plant Biology