Author

Akshay Sharathchandra

University of California, San Francisco

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:proteomics· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Joseph L. DeRisiiD· 2 shared Michael R. WilsoniD· 2 shared Ravi DandekariD· 2 shared A J Green· 1 shared Aaron BodanskyiD· 1 shared Alyssa Terry ReddyiD· 1 shared Andrew B. McKeoniD· 1 shared Bonny D. AlvarengaiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersImmunology

Joseph L. DeRisiORCID

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2 papers

Recent·Most cited

AEGIS reveals epitope- and clone-resolved convergence of CNS B and T cell autoreactivity in ROHHAD

Aaron Bodansky, Vida Ahyong, Monica T. Dayao, James Asaki, ShiLu Vanasupa, Ravi Dandekar, Shini Chen, Joe Sabatino, Sam Klauer, Giselle M. Knudsen, Carlos Lizama Valenzuela, Krista Mccutcheon, Kelsey Zorn, Sukhman Sidhu, David Yu, , Joseph L. DeRisi

AEGIS identifies epitope- and clone-specific autoimmunity in ROHHAD by linking immune repertoires to self-epitopes, revealing convergence on ZSCAN1 epitopes in the CNS.

bioRxiv · May 11, 2026 · PreprintImmunology

Autoreactomes in Healthy Individuals Vary According to HLA Class II Genotype

Rayo Suseno, Juliano André Boquett, Ravi Dandekar, Thomas Ituarte, Akshay Sharathchandra, Bonny D. Alvarenga, Cynthia Vierra‐Green, Stephen R. Spellman, Martin J. Maiers, Joseph L. DeRisi, Michael R. Wilson, Jill A. Hollenbach

This study identifies distinct autoreactomes in healthy individuals based on HLA-DRB1 genotype using PhIP-Seq, showing genotype-specific autoantibody profiles and potential pathogenic autoantibodies before disease onset.

bioRxiv · Feb 26, 2026 · PreprintImmunology