Author

Alireza Khatamian

St. Jude Children's Research Hospital

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:deconvolution· 1 Assay:electronic health records· 1 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Jiyang YuiD· 2 shared Aleksandr Y. AravkiniD· 1 shared Chad BurdyshawiD· 1 shared Chenxi Qian· 1 shared Eric W. DeutschiD· 1 shared Gustavo GlusmaniD· 1 shared Hao ShiiD· 1 shared Hongbo ChiiD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersSystems Biology

Jiyang YuORCID

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2 papers

Recent·Most cited

scMINER: a mutual information-based framework for identifying hidden drivers from single-cell omics data

Liang Ding, Hao Shi, Chenxi Qian, Chad Burdyshaw, Joao Pedro Veloso, Alireza Khatamian, Qingfei Pan, Yogesh Dhungana, Zhen Xie, Isabel Risch, Xu Yang, Xin Huang, Lei Yan, Michael Rusch, Michael Brewer, , Jiyang Yu

scMINER identifies hidden drivers and network rewiring in single-cell RNA-seq data using mutual information, outperforming existing methods in clustering and network inference.

bioRxiv · Jan 26, 2023 · PreprintSystems Biology

Fast and simple comparison of semi-structured data, with emphasis on electronic health records

Max Robinson, Jennifer Hadlock, Jiyang Yu, Alireza Khatamian, Aleksandr Y. Aravkin, Eric W. Deutsch, Nathan D. Price, Sui Huang, Gustavo Glusman

The paper introduces a fast hashing method for comparing semi-structured data, demonstrating its use on electronic health records for duplicate detection and clustering.

bioRxiv · Sep 30, 2018 · PreprintBioinformatics