Author

Amy Lei

New York University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Christine VogeliD· 2 shared Justin RendlemaniD· 2 shared Kristina AllgoeweriD· 2 shared Shuvadeep MaityiD· 2 shared Anna HerrmannováiD· 1 shared Brian John ParkeriD· 1 shared Daniel SultanoviD· 1 shared Guoshou TeoiD· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersSystems Biology

Christine VogelORCID

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2 papers

Recent·Most cited

Regulatory start-stop elements in 5' untranslated regions pervasively modulate translation

Justin Rendleman, Solomon A. Haizel, Shaohuan Wu, Junjie Liu, Xinyi Ge, Huijing Zou, Mahabub Pasha Mohammad, Matthew Pressler, Shuvadeep Maity, Vladislava Hronová, Zhaofeng Gao, Anna Herrmannová, Amy Lei, Kristina Allgoewer, Daniel Sultanov, , Christine Vogel

The paper identifies start-stop elements in 5' UTRs that repress translation by halting ribosomes, showing their prevalence in human genes and impact on cellular processes.

bioRxiv · Jul 26, 2021 · PreprintSystems Biology

Quantifying multi-layered expression regulation in response to stress of the endoplasmic reticulum

Justin Rendleman, Zhe Cheng, Shuvadeep Maity, Nicolai Kastelić, Mathias Munschauer, Kristina Allgoewer, Guoshou Teo, Yun Bin Zhang, Amy Lei, Brian John Parker, Markus Landthaler, Lindsay Freeberg, Scott Kuersten, Hyungwon Choi, Christine Vogel

The paper quantifies gene expression regulation at multiple layers in response to ER stress in cervical cancer cells over time, identifying shared and stress-specific regulatory events.

bioRxiv · Apr 25, 2018 · PreprintSystems Biology