Spatially resolved integrative analysis of transcriptomic and metabolomic changes in tissue injury studies
Eleanor C Williams, Lovisa Franzén, Martina Olsson Lindvall, Gregory R. Hamm, Steven Oag, Muntasir Mamun Majumder, James Denholm, Azam Hamidinekoo, Javier Escudero Morlanes, Marco Vicari, Joakim Lundeberg, Laura C. Setyo, Trevor M. Godfrey, Lívia S. Eberlin, Aleksandr Zakirov, , Irina Mohorianu
The paper introduces MAGPIE, a framework for integrating spatial transcriptomics, metabolomics, and tissue morphology data, demonstrating its application in studying drug-induced pulmonary fibrosis.
Nature Communications · Jan 7, 2026Peer-reviewedBioinformatics