Author

Annabel Ebbing

Royal Netherlands Academy of Arts and Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:C. elegans· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Approach:contrastive learning· 1 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Alexander van OudenaardeniD· 2 shared Hendrik C. KorswageniD· 2 shared Ábel VértesyiD· 1 shared Anna AlemanyiD· 1 shared Bastiaan SpanjaardiD· 1 shared Eugène BerezikoviD· 1 shared Greg J. StephensiD· 1 shared Jan Philipp JunkeriD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersSystems Biology

Alexander van OudenaardenORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Functional modules from variable genes: Leveraging percolation to analyze noisy, high-dimensional data

Steffen Werner, W. Mathijs Rozemuller, Annabel Ebbing, Anna Alemany, Joleen J.H. Traets, Jeroen Sebastiaan van Zon, Alexander van Oudenaarden, Hendrik C. Korswagen, Greg J. Stephens, Thomas Simon Shimizu

The paper introduces a density-based clustering method using percolation theory to identify functionally related gene modules from noisy, high-dimensional RNA sequencing data across different organisms.

bioRxiv · Jun 10, 2020 · PreprintSystems Biology

Spatial transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes

Annabel Ebbing, Ábel Vértesy, Marco C. Betist, Bastiaan Spanjaard, Jan Philipp Junker, Eugène Berezikov, Alexander van Oudenaarden, Hendrik C. Korswagen

The paper uses spatial transcriptomics to identify novel fertility genes in C. elegans by analyzing gene expression patterns in males and hermaphrodites.

bioRxiv · Jun 15, 2018 · PreprintGenomics