Benchmarking Software for DDA-PASEF Immunopeptidomics
Yannic Chen, Annica Preikschat, Annette Arnold, Riccardo Pecori, David Gomez‐Zepeda, Stefan Tenzer
This study benchmarks DDA-PASEF immunopeptidomics software tools, showing PEAKS identifies the most immunopeptides, while database size affects performance across platforms.
Molecular & Cellular Proteomics · Dec 20, 2025Peer-reviewedBioinformatics