Author

B. J. Haas

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Organism:human· 2 Assay:long-read sequencing· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1

Frequent Co-Authors

A. Dondi· 2 shared N. Beerenwinkel· 2 shared A. Khorgade· 1 shared A. M. AlKhafaji· 1 shared A. Shin· 1 shared C. Nusbaum· 1 shared D. Zabezhinsky· 1 shared E. White· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersCancer Biology

A. Dondi

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Author profile →

3 papers

Recent·Most cited

De novo detection of somatic variants in high-quality long-read single-cell RNA sequencing data

A. Dondi, N. Borgsmüller, P. F. Ferreira, B. J. Haas, F. Jacob, V. Heinzelmann-Schwarz, Tumor Profiler Consortium, N. Beerenwinkel

LongSom detects somatic variants in LR scRNA-seq data without normal samples, revealing clonal heterogeneity in ovarian cancer.

bioRxiv · Mar 6, 2024Cancer Biology

CTAT-LR-fusion: accurate fusion transcript identification from long and short read isoform sequencing at bulk or single cell resolution

Q. Qin, V. Popic, H. Yu, E. White, A. Khorgade, A. Shin, K. Wienand, A. Dondi, N. Beerenwinkel, F. Vazquez, A. M. AlKhafaji, B. J. Haas

CTAT-LR-fusion detects fusion transcripts from long and short read RNA-seq data, improving accuracy in bulk and single cell transcriptomes.

bioRxiv · Feb 24, 2024Cancer Biology

Multiplexed mRNA assembly into ribonucleoprotein particles plays an operon-like role in the control of yeast cell physiology

R. R. Nair, D. Zabezhinsky, R. Gelin-Licht, B. J. Haas, M. C. A. Dyhr, H. S. Sperber, C. Nusbaum, J. E. Gerst

The paper identifies transperons in yeast, multiplexed mRNP particles formed by mRNAs from different chromosomes, and shows their dependence on H4 histones for function.

bioRxiv · Jun 28, 2020Cell Biology