Author

B. Rife Magalis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Organism:non-human primate· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:host-pathogen & immune response· 1 Approach:machine learning (classical)· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

M. Salemi· 2 shared S. Marini· 2 shared A. Ramirez-Mata· 1 shared A. Riva· 1 shared A. S. Ramirez-Mata· 1 shared C. N. Mavian· 1 shared D. J. Nolan· 1 shared D. Moraga Amador· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersEvolutionary Biology

M. Salemi

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2 papers

Recent·Most cited

Evolutionary BiologybioRxivJun 17, 2022

Machine learning prediction and phyloanatomic modeling of viral neuroadaptive signatures in the macaque model of HIV-mediated neuropathology

A. Ramirez-Mata, B. Rife Magalis, S. Marini…·D. Ostrov

The paper applies a machine learning approach to predict SIV-mediated encephalitis using gp120 sequences from macaques, identifying signatures associated with neuroadaptation and revealing their presence in non-CNS tissues.

DOI 10.1128/spectrum.03086-22

non-human primateproteomics

𝕏 PostBluesky

PathologybioRxivMay 21, 2020

Brain tissue transcriptomic analysis of SIV-infected macaques identifies several altered metabolic pathways linked to neuropathogenesis, and Poly (ADP-ribose) polymerases (PARPs) as potential therapeutic targets

C. N. Mavian, A. S. Ramirez-Mata, J. J. Dollar…·M. Salemi

This study analyzes transcriptomic data from SIV-infected macaques to identify altered metabolic pathways and PARPs as potential therapeutic targets in HIV-associated neurodegeneration.

DOI 10.1007/s13365-020-00927-z

non-human primatebulk RNA-seq

𝕏 PostBluesky