Author

S. Marini

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Pathology· 1

Signature Assays, Organisms & Methods

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Organism:non-human primate· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:host-pathogen & immune response· 1 Approach:machine learning (classical)· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

M. Salemi· 3 shared B. Rife Magalis· 2 shared M. Prosperi· 2 shared A. Ramirez-Mata· 1 shared A. Riva· 1 shared A. S. Ramirez-Mata· 1 shared C. Mavian· 1 shared C. N. Mavian· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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3 shared papersEvolutionary Biology

M. Salemi

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Author profile →

3 papers

Recent·Most cited

Machine learning prediction and phyloanatomic modeling of viral neuroadaptive signatures in the macaque model of HIV-mediated neuropathology

A. Ramirez-Mata, B. Rife Magalis, S. Marini, M. Salemi, D. Ostrov

The paper applies a machine learning approach to predict SIV-mediated encephalitis using gp120 sequences from macaques, identifying signatures associated with neuroadaptation and revealing their presence in non-CNS tissues.

bioRxiv · Jun 17, 2022Evolutionary Biology

Brain tissue transcriptomic analysis of SIV-infected macaques identifies several altered metabolic pathways linked to neuropathogenesis, and Poly (ADP-ribose) polymerases (PARPs) as potential therapeutic targets

C. N. Mavian, A. S. Ramirez-Mata, J. J. Dollar, D. J. Nolan, K. White, S. N. Rich, B. Rife Magalis, M. N. Cash, S. Marini, M. Prosperi, D. Moraga Amador, A. Riva, K. C. Williams, M. Salemi

This study analyzes transcriptomic data from SIV-infected macaques to identify altered metabolic pathways and PARPs as potential therapeutic targets in HIV-associated neurodegeneration.

bioRxiv · May 21, 2020Pathology

A snapshot of SARS-CoV-2 genome availability up to 30th March, 2020 and its implications

C. Mavian, S. Marini, M. Prosperi, M. Salemi

The paper assesses SARS-CoV-2 genome availability up to March 30, 2020, finding sufficient phylogenetic data overall but severe limitations in country-specific datasets.

bioRxiv · Apr 1, 2020 · PreprintEvolutionary Biology