Author
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
10 papers
Recent·Most cited
J. Duran, S. Poolsup, l. Allers, M. Leums, Q. Cheng, J. Pu, M. Salemi, B. Phinney, J. Jia
The paper identifies a calcium-dependent pathway involving ALIX that links lysosomal damage to stress granule formation, promoting cell survival in response to various stressors.
bioRxiv · Mar 29, 2024 · PreprintCell Biology
A. Ramirez-Mata, B. Rife Magalis, S. Marini, M. Salemi, D. Ostrov
The paper applies a machine learning approach to predict SIV-mediated encephalitis using gp120 sequences from macaques, identifying signatures associated with neuroadaptation and revealing their presence in non-CNS tissues.
bioRxiv · Jun 17, 2022Evolutionary Biology
M. A. Sayeed, T. Paisie, M. T. Alam, A. Ali, A. Camilli, J. Wrammert, A. I. Khan, F. Qadri, M. Salemi, J. G. Morris, E. J. Nelson
This study develops a monoclonal antibody to the vibriophage ICP1 to improve cholera detection in rapid diagnostic tests by detecting the phage as a proxy for Vibrio cholerae.
bioRxiv · Apr 8, 2022Immunology
A. R. Patel, M. Dulcey, N. Abid, M. N. Cash, J. Dailey, M. Salemi, C. Mavian, A. Y. Vittor
This study compares the infectivity of three geographically distinct Mayaro virus isolates in human cell lines, finding one isolate exhibits faster infection kinetics and greater cytopathic effect due to mutations in the E2 protein.
bioRxiv · Sep 29, 2021 · PreprintMicrobiology
E. Song, C. M. Bartley, R. D. Chow, T. Ngo, R. Jiang, C. R. Zamecnik, R. Dandekar, R. Loudermilk, Y. Dai, F. Liu, I. Hawes, B. D. Alvarenga, T. Huynh, L. McAlpine, N.-T. Rahman, , S. F. Farhadian
The paper identifies CNS-specific immune alterations in COVID-19 patients with neurological symptoms, suggesting neuroinvasion and anti-neural autoimmunity as potential causes.
bioRxiv · Sep 11, 2020Immunology
C. N. Mavian, A. S. Ramirez-Mata, J. J. Dollar, D. J. Nolan, K. White, S. N. Rich, B. Rife Magalis, M. N. Cash, S. Marini, M. Prosperi, D. Moraga Amador, A. Riva, K. C. Williams, M. Salemi
This study analyzes transcriptomic data from SIV-infected macaques to identify altered metabolic pathways and PARPs as potential therapeutic targets in HIV-associated neurodegeneration.
bioRxiv · May 21, 2020Pathology
C. Mavian, S. Marini, M. Prosperi, M. Salemi
The paper assesses SARS-CoV-2 genome availability up to March 30, 2020, finding sufficient phylogenetic data overall but severe limitations in country-specific datasets.
bioRxiv · Apr 1, 2020 · PreprintEvolutionary Biology
M. S. Tagliamonte, N. Adid, D. A. Ostrov, G. Chillemi, S. L. Kosakovsky Pond, M. Salemi, C. N. Mavian
The paper analyzes SARS-CoV-2 evolution and structure to show recombination and purifying selection shape the S glycoprotein's function and efficiency in human infection.
bioRxiv · Mar 30, 2020 · PreprintEvolutionary Biology
S. M. Boyles, C. N. Mavian, E. Finol, M. Ukhanova, C. J. Stephenson, G. Hamerlinck, S. Kang, C. Baumgartner, M. Geesey, I. Stinton, K. Williams, D. K. Mathias, M. Prosperi, V. Mai, M. Salemi, , R. R. Dinglasan
The paper identifies circulating DENV4 in Aedes aegypti mosquitoes without corresponding human cases, highlighting gaps in current surveillance methods.
bioRxiv · Jan 24, 2020Ecology
B. Rife Magalis, S. L. Strickland, S. D. Shank, P. Autissier, A. Schuetz, P. Sithinamsuwam, S. Lerdlum, J. L. K. Fletcher, M. de Souza, J. Ananworanich, V. Valcour, K. C. Williams, S. L. Kosakovsky Pond, S. Ratto Kim, M. Salemi, SEARCH007
This study shows that HIV-1 evolves differently in monocytes compared to T cells, suggesting monocytes may be a significant viral reservoir.
bioRxiv · Dec 12, 2018 · PreprintEvolutionary Biology