Author

Bhavani A. Sanagavarapu

Donor Network West

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Ahmad SalehiiD· 2 shared Angela Oliveira PiscoiD· 2 shared Baoxiang LiiD· 2 shared Bronwyn ScottiD· 2 shared Burnett S. KellyiD· 2 shared Francisco X. GaldosiD· 2 shared Hayley M. Raquer-McKayiD· 2 shared Ivana CvijovićiD· 2 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Ahmad SalehiORCID

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2 papers

Recent·Most cited

BioinformaticsNature CommunicationsPeer-reviewedOct 28, 2025

Benchmarking Cell Type and Gene Set Annotation by Large Language Models with AnnDictionary

George Crowley, Robert C. Jones, Mark A. Krasnow…·David Seong

The paper benchmarks large language models for cell-type and gene set annotation using AnnDictionary, finding high accuracy in cell-type annotation and strong functional gene set recovery.

11 citations

bulk RNA-seqmachine learning (classical)

𝕏 PostBluesky

Cell BiologySciencePeer-reviewedMay 12, 2022

The Tabula Sapiens: a multiple organ single cell transcriptomic atlas of humans

Robert C. Jones, Jim Karkanias, Mark A. Krasnow…·Andrea R. Yung

Nearly 500,000 cells from 24 human tissues, many from one donor, characterize over 400 cell types and enable within-donor study of T-cell clones, B-cell mutation rates and splicing.

1,058 citationstop 1%

humanscRNA-seq

𝕏 PostBluesky