Author

Brian J Allen

University of California, Davis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:whole-genome sequencing· 2 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Organism:plant (other)· 1 Approach:statistical model· 1

Frequent Co-Authors

Aleksey V. ZiminiD· 2 shared Daniela PuiuiD· 2 shared David B Neale· 2 shared Steven L. SalzbergiD· 2 shared Winston TimpiD· 2 shared Abhaya M. DandekariD· 1 shared Akriti Bhattarai· 1 shared Amanda R. De La TorreiD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Aleksey V. ZiminORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

A genome sequence for the threatened whitebark pine

David B Neale, Aleksey V. Zimin, Amy Meltzer, Akriti Bhattarai, Maurice Amee, Laura Figueroa‐Corona, Brian J Allen, Daniela Puiu, Jessica W. Wright, Amanda R. De La Torre, Patrick E. McGuire, Winston Timp, Steven L. Salzberg, Jill Wegrzyn

The paper produces a high-quality genome sequence for whitebark pine and identifies NLR genes associated with resistance to white pine blister rust.

G3 Genes Genomes Genetics · Mar 25, 2024Peer-reviewedGenomics

High-quality chromosome-scale assembly of the walnut (Juglans regia L) reference genome

Annarita Marrano, Monica Britton, Paulo A. Zaini, Aleksey V. Zimin, Rachael Workman, Daniela Puiu, Luca Bianco, Erica A. Di Pierro, Brian J Allen, Sandeep Chakraborty, Michela Troggio, Charles A. Leslie, Winston Timp, Abhaya M. Dandekar, Steven L. Salzberg, David B Neale

This paper presents a chromosome-scale walnut genome assembly, improving gene prediction and enabling better analysis of genetic diversity and proteomic changes.

GigaScience · May 1, 2020Peer-reviewedGenomics