Author

Rachael Workman

Johns Hopkins UniversityORCID 0000-0002-3779-9173Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:genome assembly· 2 Assay:whole-genome sequencing· 2 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:human· 1 Organism:plant (other)· 1 Approach:statistical model· 1

Frequent Co-Authors

Winston TimpiD· 3 shared Aleksey V. ZiminiD· 2 shared Daniela PuiuiD· 2 shared Monica Britton· 2 shared Steven L. SalzbergiD· 2 shared Abhaya M. DandekariD· 1 shared Adam Joseph BogdanoveiD· 1 shared Alison Dawn ScottiD· 1 shared

Activity by Year

2016-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersGenomics

Winston TimpORCID

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3 papers

Recent·Most cited

High-quality chromosome-scale assembly of the walnut (Juglans regia L) reference genome

Annarita Marrano, Monica Britton, Paulo A. Zaini, Aleksey V. Zimin, Rachael Workman, Daniela Puiu, Luca Bianco, Erica A. Di Pierro, Brian J Allen, Sandeep Chakraborty, Michela Troggio, Charles A. Leslie, Winston Timp, Abhaya M. Dandekar, Steven L. Salzberg, David B Neale

This paper presents a chromosome-scale walnut genome assembly, improving gene prediction and enabling better analysis of genetic diversity and proteomic changes.

GigaScience · May 1, 2020Peer-reviewedGenomics

The giant sequoia genome and proliferation of disease resistance genes

Alison Dawn Scott, Aleksey V. Zimin, Daniela Puiu, Rachael Workman, Monica Britton, Sumaira Zaman, Madison Caballero, Andrew C. Read, Adam Joseph Bogdanove, Emily Burns, Jill Wegrzyn, Winston Timp, Steven L. Salzberg, David B. Neale

This paper presents the first genome assembly of the giant sequoia, enabling analysis of disease resistance genes for conservation and evolutionary studies.

bioRxiv · Mar 17, 2020 · PreprintGenomics

Detecting DNA Methylation using the Oxford Nanopore Technologies MinION sequencer

Jared T Simpson, Rachael Workman, Philip C Zuzarte, Matei David, Lewis Jonathan Dursi, Winston Timp

This study quantifies the ability of the MinION sequencer to detect DNA methylation using synthetic DNA and demonstrates reliable prediction of CpG island methylation from single reads.

bioRxiv · Apr 4, 2016Genomics