Author

C. S. Chan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 6 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 5 Research Focus:cell type annotation· 4 Assay:metagenomics· 4 Organism:bacteria (other)· 2 Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:benchmark study· 1

Frequent Co-Authors

S. W. Polson· 3 shared D. Emerson· 2 shared J. L. Keffer· 2 shared R. L. Hoover· 2 shared S. M. McAllister· 2 shared A. Gartman· 1 shared A. L. Seyfferth· 1 shared A. Verma· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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3 shared papersMicrobiology

S. W. Polson

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Gallionellaceae in rice root plaque: metabolic roles in iron oxidation, nutrient cycling and plant interactions

C. S. Chan, G. E. Dykes, R. L. Hoover, M. A. Limmer, A. L. Seyfferth

This study identifies iron-oxidizing bacteria in rice root iron plaques, showing their role in iron cycling, plant interactions, and nutrient dynamics.

bioRxiv · Apr 7, 2023Microbiology

Gallionellaceae pangenomic analysis reveals insight into phylogeny, metabolic flexibility, and iron oxidation mechanisms

R. L. Hoover, J. L. Keffer, S. W. Polson, C. S. Chan

This study uses pangenomic analysis of 103 Gallionellaceae genomes to reveal their phylogeny, metabolic flexibility, and iron oxidation mechanisms, identifying novel multiheme c-type cytochromes involved in extracellular electron uptake.

bioRxiv · Jan 26, 2023Microbiology

Unraveling Fe(II)-oxidizing mechanisms in a facultative Fe(II) oxidizer Sideroxydans lithotrophicus ES-1 via culturing, transcriptomics, and RT-qPCR

N. Zhou, J. L. Keffer, S. W. Polson, C. S. Chan

This study investigates Fe(II) oxidation mechanisms in Sideroxydans lithotrophicus ES-1 using transcriptomics and RT-qPCR, identifying Cyc2 as the Fe(II) oxidase and linking Fe(II) oxidation to carbon fixation.

bioRxiv · Aug 18, 2021Microbiology

Zetaproteobacteria pan-genome reveals candidate gene cluster for twisted stalk biosynthesis and export

E. Koeksoy, O. M. Bezuidt, D. Emerson, C. S. Chan, T. Bayer

The paper identifies a gene cluster associated with twisted stalk biosynthesis and export in Zetaproteobacteria through pan-genome analysis.

bioRxiv · Mar 12, 2021Microbiology

Validating the Cyc2 neutrophilic Fe oxidation pathway using meta-omics of Zetaproteobacteria iron mats at marine hydrothermal vents

S. M. McAllister, S. W. Polson, D. A. Butterfield, B. T. Glazer, J. B. Sylvan, C. S. Chan

The paper validates the Cyc2-based Fe oxidation pathway in Zetaproteobacteria using meta-omics data from marine hydrothermal vent iron mats.

mSystems · Feb 11, 2020Peer-reviewedMicrobiology

Function and clinical relevance of RHAMM isoforms in pancreatic tumor progression

S. Choi, D. Wang, X. Chen, L. H. Tang, A. Verma, Z. Chen, B. J. Kim, L. Selesner, K. Robzyk, G. Zhang, S. Pang, T. Han, C. S. Chan, T. J. Fahey, O. Elemento, Y.-C. N. Du

This study identifies RHAMMB as a key driver of pancreatic tumor metastasis, showing its upregulation in PNETs and correlation with poor patient survival through EGFR signaling.

bioRxiv · Apr 8, 2019Cancer Biology

Marine Fe-oxidizing Zetaproteobacteria: Historical, ecological, and genomic perspectives

S. M. McAllister, R. M. Moore, A. Gartman, G. W. Luther, D. Emerson, C. S. Chan

This study examines the diversity and ecological roles of Zetaproteobacteria across various marine and terrestrial environments using 16S rRNA gene sequences and genomic analysis.

bioRxiv · Sep 16, 2018Microbiology