Author

Caitlin Newman

Edinburgh Genomics

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:genome assembly· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Research Focus:database / resource· 1 Organism:human· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Javier Santoyo‐LópeziD· 2 shared Urmi H. TrivediiD· 2 shared Alex D. TwyfordiD· 1 shared Alison M. MeynertiD· 1 shared Alison Ross· 1 shared Alistair T. PagnamentaiD· 1 shared Amanda WarriD· 1 shared Anne Lampe· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Javier Santoyo‐LópezORCID

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Author profile →

3 papers

Recent·Most cited

Detecting pathogenic structural variation in families with undiagnosed rare disease in a national genome project

Prasun Dutta, Alistair T. Pagnamenta, Christelle Robert, Anthony McGuigan, Alison Ross, Edward S. Tobias, Ruth McGowan, Morad Ansari, David U. Baty, Jonathan N. Berg, Therese Bradley, Vera Cerqueira, Austin G. Diamond, Mihail R. Halachev, Anne Lampe, , Timothy J. Aitman

This study uses long-read sequencing to identify pathogenic structural variants in undiagnosed rare disease families, increasing diagnostic yield in three families.

European Journal of Human Genetics · Aug 5, 2026Peer-reviewedGenetic & Genomic Medicine

A workflow for practical training in ecological genomics using Oxford Nanopore long-read sequencing

Robert S. Foster, Heleen De Weerd, Nathan Medd, Tim Booth, Caitlin Newman, Helen Ritch, Javier Santoyo‐López, Urmi H. Trivedi, Alex D. Twyford

The paper presents a long-read sequencing workflow for ecological genomics education, enabling students to assemble and identify plant genomes within two weeks.

bioRxiv · Sep 3, 2024 · PreprintGenomics

No part gets left behind: Tiled nanopore sequencing of whole ASFV genomes stitched together using Lilo

Amanda Warr, Caitlin Newman, Nicky Craig, Ingrida Vendelė, Rizalee Pilare, Lilet Cariazo Cruz, Twinkle Galase Barangan, Reildrin G. Morales, Tanja Opriessnig, Virginia Venturina, M. R. Mananggit, Samantha Lycett, Clarissa Yvonne J. Domingo, Christine Tait‐Burkard

The paper presents a method for efficient, low-cost sequencing of ASFV genomes using tiled PCR and a new pipeline called Lilo, resulting in near-complete genomes with high accuracy.

bioRxiv · Dec 1, 2021 · PreprintBioinformatics