Author

Tim Booth

Edinburgh GenomicsORCID 0000-0003-2470-9519Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Research Focus:genome assembly· 2 Assay:long-read sequencing· 1 Organism:plant (other)· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Heleen De WeerdiD· 2 shared Urmi H. TrivediiD· 2 shared Alex D. TwyfordiD· 1 shared Andrea PorcedduiD· 1 shared Caitlin Newman· 1 shared Helen Ritch· 1 shared Javier Santoyo‐LópeziD· 1 shared Lia ObinuiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Heleen De WeerdORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

GenomicsBioinformaticsPeer-reviewedApr 14, 2025

Colora: A Snakemake Workflow for Complete Chromosome-scale De Novo Genome Assembly

Lia Obinu, Tim Booth, Heleen De Weerd…·Andrea Porceddu

Colora provides a Snakemake workflow for automated, high-quality chromosome-scale de novo genome assembly using PacBio HiFi, Hi-C, and optionally ONT reads.

2 citations

whole-genome sequencingexperimental assay

𝕏 PostBluesky

GenomicsbioRxivPreprintSep 3, 2024

A workflow for practical training in ecological genomics using Oxford Nanopore long-read sequencing

Robert S. Foster, Heleen De Weerd, Nathan Medd…·Alex D. Twyford

The paper presents a long-read sequencing workflow for ecological genomics education, enabling students to assemble and identify plant genomes within two weeks.

DOI 10.1101/2024.09.03.610948

plant (other)long-read sequencing

𝕏 PostBluesky