Author

Carmen Xiao

Illumina (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:imaging· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Alireza MajdiD· 1 shared Annarita Scaramozza· 1 shared Behnam Javanmardi· 1 shared Camilla ValenteiD· 1 shared Chris Cox· 1 shared Chun YeiD· 1 shared Craig Betts· 1 shared Dan CaoiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperSystems Biology

Alireza MajdORCID

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Author profile →

2 papers

Recent·Most cited

Scalable longitudinal imaging and transcriptomics of cells in dynamic enclosures

Tarun K. Khurana, Liz Y. Wu, Pier Federico Gherardini, Seyedsina Moeinzadeh, Mehdi Mohseni, Filiz Gorpe Yasar, Roger Dettloff, Justin Poelma, Shan Sabri, Annarita Scaramozza, Yunmin Li, Nirvan Rouzbeh, Nicholas Elder, Shreya S. Deshmukh, Alireza Majd, , Mostafa Ronaghi

This paper develops a platform for longitudinal imaging and transcriptomics of live cells, revealing adaptive drug-resistant states and key drivers of cellular function through integrated analysis.

bioRxiv · May 8, 2026 · PreprintSystems Biology

Single cell sequencing as a general variant interpretation assay

Hongxia Xu, Ling Chen, Mohan Sun, Ken Jean-Baptiste, Dan Cao, Xingyan Zhou, Sandy Wong, Carmen Xiao, Tong Liu, Victor J. Quijano, Nadav Brandes, Joe Germino, Vasilis Ntranos, Chun Ye, François Aguet, Kyle Kai‐How Farh

The paper uses single cell RNA sequencing to assess the effects of protein-altering variants in three genes, showing that single cell expression signatures are more effective than bulk assays and computational models for predicting pathogenicity.

bioRxiv · Dec 12, 2023 · PreprintGenomics