Author

Cary Brandolino

University of Chicago

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Organism:non-human primate· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Anne Dumaine· 3 shared Luis Bruno BarreiroiD· 3 shared Raúl Aguirre‐GamboaiD· 3 shared DE KaufmanniD· 2 shared Ellen KetteriD· 2 shared Haley E. RandolphiD· 2 shared Veronica LocheriD· 2 shared Zepeng MuiD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Anne Dumaine

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Widespread gene-environment interactions shape the immune response to SARS-CoV-2 infection in hospitalized COVID-19 patients

Haley E. Randolph, Raúl Aguirre‐Gamboa, Elsa Brunet‐Ratnasingham, Tomoko Nakanishi, Zepeng Mu, Veronica Locher, Ellen Ketter, Cary Brandolino, Catherine Larochelle, Alexandre Prat, Nathalie Arbour, Anne Dumaine, Andrés Finzi, Madéleine Durand, John Brent Richards, , Luis Bruno Barreiro

This study identifies gene-environment interactions influencing immune response to SARS-CoV-2 in hospitalized patients using single-cell RNA-sequencing and eQTL analysis.

Nature Communications · Apr 28, 2026Peer-reviewedGenomics

Adaptive immune responses to vaccination reflect social status at first exposure in female rhesus macaques

João Barroso-Batista, C. Ryan Campbell, Noah D. Simons, Paul L. Maurizio, Raúl Aguirre‐Gamboa, Anne Dumaine, Mari Shiratori, Tawni Mondragon, Cary Brandolino, Vas Michopoulos, Jenny Tung, Luis Bruno Barreiro

This study shows that social status at first exposure, but not secondary exposure, influences antibody responses and gene expression in vaccinated female rhesus macaques.

bioRxiv · Mar 5, 2026 · PreprintGenomics

Impact of disease-associated chromatin accessibility QTLs across immune cell types and contexts

Zepeng Mu, Haley E. Randolph, Raúl Aguirre‐Gamboa, Ellen Ketter, Anne Dumaine, Veronica Locher, Cary Brandolino, Xuanyao Liu, DE Kaufmann, Luis Bruno Barreiro, Yang Li

The paper identifies chromatin accessibility QTLs (caQTLs) in immune cells and finds they colocalize more with GWAS loci than eQTLs, but often lack downstream gene expression effects.

Cell Genomics · Nov 11, 2025Peer-reviewedGenetic & Genomic Medicine