STECode: an automated virulence barcode generator to aid clinical and public health risk assessment of Shiga toxin-producing Escherichia coli
Eby M. Sim, Winkie Fong, Carl J. E. Suster, Jessica E. Agius, Shona Chandra, Basel Suliman, Qinning Wang, Christine Ngo, Connor Finemore, Sharon C.‐A. Chen, Kerri Basile, Vitali Sintchenko
STECode automates virulence barcode generation for Shiga toxin-producing E. coli to assess pathogenic potential from sequencing data.
bioRxiv · May 7, 2024 · PreprintMicrobiology