Author

D. Kohda

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 3 Assay:protein structure· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Assay:proteomics· 1

Frequent Co-Authors

D. Fujinami· 2 shared S. Hayashi· 2 shared A. Shimada· 1 shared A. Takano· 1 shared J. Ahn· 1 shared K. Hirose· 1 shared K. Katoh· 1 shared M. Wada· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersBiophysics

D. Fujinami

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3 papers

Recent·Most cited

Residue-based correlation between equilibrium and rate constants is an experimental formulation of the consistency principle for smooth structural changes of proteins

D. Kohda, S. Hayashi, D. Fujinami

The paper formulates the consistency principle as a quadratic relationship between residue-specific equilibrium and rate constants, providing an experimental method to verify smooth protein folding.

bioRxiv · Oct 24, 2022Biophysics

Deviation from the Residue-Based Linear Free Energy Relationship Reveals a Non-Native Structure in Protein Folding

D. Fujinami, S. Hayashi, D. Kohda

The paper examines the residue-based linear free energy relationship (rbLFER) in protein folding and finds deviations from linearity indicate non-native structures in transition states.

bioRxiv · Jan 7, 2022Biophysics

CHLOROPLAST UNUSUAL POSITIONING 1 is a new type of actin nucleation factor in plants

S.-G. Kong, A. Shimada, S. T. Kijima, K. Hirose, K. Katoh, J. Ahn, T. Higa, A. Takano, Y. Nakamura, N. Suetsugu, D. Kohda, T. Q. P. Uyeda, M. Wada

This study identifies CHUP1 as a plant-specific actin nucleator involved in chloroplast movement by interacting with cp-actin filaments and responding to blue light.

bioRxiv · Jan 14, 2020 · PreprintPlant Biology