Author

Douglass Turner

Baylor College of Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Assay:Hi-C· 2 Research Focus:software / tool· 2 Research Focus:database / resource· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Erez Lieberman AideniD· 3 shared Helga Thorvaldsdóttir· 2 shared James RobinsoniD· 2 shared Jill P. MesiroviD· 2 shared Adrian L. SanborniD· 1 shared Arina D. OmeriD· 1 shared B BernsteiniD· 1 shared Brian Glenn St Hilaire· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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3 shared papersBioinformatics

Erez Lieberman AidenORCID

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4 papers

Recent·Most cited

igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV)

James T Robinson, Helga Thorvaldsdóttir, Douglass Turner, Jill P. Mesirov

igv.js provides a web-based, embeddable version of the Integrative Genomics Viewer with no external dependencies or backend requirements.

Bioinformatics · Dec 22, 2022Peer-reviewedBioinformatics

GSDB: a database of 3D chromosome and genome structures reconstructed from Hi-C data

Oluwatosin Oluwadare, Max R. Highsmith, Douglass Turner, Erez Lieberman Aiden, Jianlin Jack Cheng

GSDB provides a comprehensive repository of 3D genome structures reconstructed from Hi-C data, containing over 50,000 structures from 12 methods.

BMC Molecular and Cell Biology · Aug 5, 2020Peer-reviewedBioinformatics

Juicebox.js provides a cloud-based visualization system for Hi-C data

James Robinson, Douglass Turner, Neva C. Durand, Helga Thorvaldsdóttir, Jill P. Mesirov, Erez Lieberman Aiden

Juicebox.js is a cloud-based tool for visualizing Hi-C data, enabling users to explore and share 3D genome structures through an intuitive interface.

Cell Systems · Feb 1, 2018Peer-reviewedBioinformatics

Cohesin Loss Eliminates All Loop Domains, Leading To Links Among Superenhancers And Downregulation Of Nearby Genes

Suhas S.P. Rao, Su-Chen Eileen Huang, Brian Glenn St Hilaire, J Engreitz, Elizabeth M. Perez, Kyong-Rim Kieffer-Kwon, Adrian L. Sanborn, Sarah E. Johnstone, Gavin D. Bascom, Ivan D. Bochkov, Xingfan Huang, Muhammad S. Shamim, Jaeweon Shin, Douglass Turner, Ziyi Ye, , Erez Lieberman Aiden

This study shows that cohesin loss eliminates loop domains, causing superenhancer links and gene downregulation, which are reversible upon cohesin restoration.

Cell · Oct 1, 2017Peer-reviewedGenomics