Author
Broad Institute
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
7 papers
Recent·Most cited
Timothy Pham, Karina Meneses-Cime, Jiayan Ma…·Pablo Tamayo
The paper introduces the Multi-scale Copula Index (MCI), an information-theoretic measure of association, and demonstrates its utility in cancer genomics for capturing contextual associations in complex datasets.
James T Robinson, Helga Thorvaldsdóttir, Jill P. Mesirov
igv-reports creates standalone HTML reports with interactive genomic visualizations to aid in variant inspection without requiring input data files.
Michael M. Reich, Thorin T. Tabor, John Liefeld…·Jill P. Mesirov
The paper introduces g2nb, a notebook environment integrating bioinformatics platforms into a unified interface for genomics analysis.
James T Robinson, Helga Thorvaldsdóttir, Douglass Turner, Jill P. Mesirov
igv.js provides a web-based, embeddable version of the Integrative Genomics Viewer with no external dependencies or backend requirements.
Anthony S. Castanza, Jill M. Recla, David Eby…·Jill P. Mesirov
The paper extends the Molecular Signatures Database to support mouse gene data by adding mouse-specific gene sets and improved orthology mapping resources.
James Robinson, Douglass Turner, Neva C. Durand…·Erez Lieberman Aiden
Juicebox.js is a cloud-based tool for visualizing Hi-C data, enabling users to explore and share 3D genome structures through an intuitive interface.
Yarden Katz, Eric T Wang, Jacob Stilterra…·Christopher B Burge
The paper introduces Sashimi plots as a method to visualize and compare isoform expression across multiple RNA-Seq samples.